chr13 : 46,629,847 46,630,047
200 bp 31 TFs 0 linked genes
This 200 bp open chromatin element has no linked target genes and is bound by 31 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:46,624,847 – 46,635,047
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 155 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 200 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 51 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 59 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 175 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 77 bp overlap
GATA1 2 datasets
ChIP erythroblast ENCFF867JAR 125 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 106 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 77 bp overlap
GATA3 2 datasets
ChIP SH-SY5Y ENCFF475HYF 100 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 78 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 134 bp overlap
ChIP DE DE-GATA4-2 200 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 159 bp overlap
ChIP DE DE-GATA6-2 200 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 179 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 124 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 200 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 200 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 200 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 200 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 200 bp overlap
MED1 1 dataset
ChIP MDA-MB-231_LQ GSE95121.MED1.MDA-MB-231_LQ 200 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 200 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 129 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 184 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 55 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 72 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 58 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 74 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 200 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 86 bp overlap
SMARCA4 2 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 56 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 128 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 200 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 200 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 64 bp overlap
ZIM3 1 dataset
ChIP HEK293 GSE76494.ZIM3.HEK293 52 bp overlap
ZKSCAN5 1 dataset
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 128 bp overlap