chr12 : 91,910,818 – 91,911,276
458 bp 39 TFs 0 linked genes
This 458 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:91,905,818 – 91,916,276
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 184 bp overlap
BRD4 3 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 180 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 178 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 73 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 390 bp overlap
CTCF 50 datasets
ChIP GM04648 GSE148179.CTCF.GM04648 222 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 147 bp overlap
ChIP GM12864 ENCFF357DQE 285 bp overlap
ChIP GM12864 ENCFF357DQE 208 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 167 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 103 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 99 bp overlap
ChIP GM12872 ENCFF697BYI 246 bp overlap
ChIP GM12873 ENCFF711LOS 244 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 179 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 288 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 147 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 211 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 164 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 211 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 75 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 58 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 174 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 235 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 170 bp overlap
ChIP MCF-7 ENCFF198DQX 210 bp overlap
ChIP MCF-7 ENCFF494VXA 210 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 187 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 152 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 92 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 200 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 255 bp overlap
ChIP Panc1 ENCFF056JQX 177 bp overlap
ChIP T-cell GSE115893.CTCF.T-cell 186 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 144 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 110 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 232 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 210 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 137 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 177 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 183 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 221 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 278 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 240 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 184 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 150 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 263 bp overlap
ChIP gastrocnemius medialis ENCFF468QWC 212 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 188 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 178 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 132 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 178 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 287 bp overlap
ChIP neural cell ENCFF335ADI 195 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 257 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 458 bp overlap
ChIP neural cell ENCFF442QNK 458 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 117 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 96 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 413 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 458 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 210 bp overlap
ChIP hESC GSE18292.NANOG.hESC 161 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 183 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 191 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 388 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 450 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 458 bp overlap
RAD21 10 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 109 bp overlap
ChIP K562 ENCFF634XYR 273 bp overlap
ChIP MCF-7 ENCFF724VCQ 191 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 177 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 193 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 175 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 117 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 348 bp overlap
ChIP neural cell ENCFF564MOT 203 bp overlap
ChIP neural cell ENCFF564MOT 155 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 273 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 230 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 219 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 319 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 216 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 231 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 172 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 229 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 182 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 355 bp overlap
ChIP neural cell ENCFF795YGY 333 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 367 bp overlap
ChIP hESC GSE18292.SOX2.hESC 147 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 206 bp overlap
SOX21 1 dataset
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 121 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
STAG1 4 datasets
ChIP HeLa GSE126990.STAG1.HeLa 122 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 122 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 170 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 136 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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