chr12 : 47,231,719 47,231,879
160 bp 26 TFs 1 linked gene
This 160 bp open chromatin element is linked to PCED1B and is bound by 26 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PCED1B 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:47,226,719 – 47,236,879
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
CDX2 3 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 122 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 122 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 158 bp overlap
CTCF 1 dataset
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 72 bp overlap
EP300 1 dataset
ChIP A-549 ENCSR000BPW.EP300.A-549 102 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 73 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 64 bp overlap
FOXA1 1 dataset
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 134 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 50 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 160 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 52 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 68 bp overlap
ChIP DE DE-GATA4-2 108 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 132 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-2 111 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 160 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 122 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 160 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 155 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 160 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 160 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 123 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 53 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 72 bp overlap
HOXB13 2 datasets
ChIP A-549 ENCSR967ZMR.HOXB13.A-549 160 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 67 bp overlap
MAF 1 dataset
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 125 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 160 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 63 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 160 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 160 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_EV-TGF GSE138496.SMAD2-3.HGrC1_EV-TGF 93 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 153 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 80 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 124 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 98 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 160 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 63 bp overlap
ChIP A-549_AG15690 GSE132290.SMARCA4.A-549_AG15690 160 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 160 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 157 bp overlap