chr12 : 46,971,025 46,971,626
601 bp 38 TFs 0 linked genes
This 601 bp open chromatin element has no linked target genes and is bound by 38 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:46,966,025 – 46,976,626
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ATF2 1 dataset
Motif DE_60h DE_60h-ATF2_MA1632.2 10 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 174 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 357 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 216 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 410 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 173 bp overlap
DPRX 1 dataset
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
DUX4 3 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 324 bp overlap
DUXA 2 datasets
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 154 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 345 bp overlap
ChIP DE DE-FOXA2-2 265 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 482 bp overlap
ChIP DE DE-GATA4-2 525 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 513 bp overlap
ChIP DE DE-GATA6-2 551 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 377 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 338 bp overlap
ChIP foregut GSE117136.GATA6.foregut 293 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
ISL2 1 dataset
Motif DE_60h DE_60h-ISL2_MA0914.2 6 bp overlap
KLF13 1 dataset
Motif DE_60h DE_60h-KLF13_MA0657.2 17 bp overlap
LHX6 1 dataset
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
NR2C1 1 dataset
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Nkx3-1 1 dataset
Motif DE_60h DE_60h-Nkx3-1_MA0124.3 7 bp overlap
Nr1H2 1 dataset
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 284 bp overlap
RORA 1 dataset
Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 345 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 273 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 211 bp overlap
SREBF1 2 datasets
Motif DE_60h DE_60h-SREBF1_MA0595.1 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_60h DE_60h-SREBF2_MA0828.3 10 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZBTB24 1 dataset
Motif DE_60h DE_60h-ZBTB24_MA2330.1 10 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 259 bp overlap
ZNF134 2 datasets
ChIP K-562 ENCSR553NTC.ZNF134.K-562 435 bp overlap
ChIP K562 ENCFF502NWS 345 bp overlap
ZNF667 1 dataset
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
ZNF692 1 dataset
Motif DE_60h DE_60h-ZNF692_MA1986.2 8 bp overlap