chr12 : 44,497,164 – 44,497,355
191 bp 26 TFs 0 linked genes
This 191 bp open chromatin element has no linked target genes and is bound by 26 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:44,492,164 – 44,502,355
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 168 bp overlap
BRD2 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 177 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 177 bp overlap
BRD4 2 datasets
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 145 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 191 bp overlap
BRD9 1 dataset
ChIP Mel270_DMSO GSE124720.BRD9.Mel270_DMSO 145 bp overlap
CEBPA 2 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 180 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 158 bp overlap
CEBPB 6 datasets
ChIP H1 ENCFF871PTR 191 bp overlap
ChIP Ishikawa ENCFF010USJ 177 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 150 bp overlap
ChIP MCF-7 ENCFF772ZTQ 175 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 137 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 155 bp overlap
CTCF 323 datasets
ChIP 22Rv1 ENCFF466OXN 191 bp overlap
ChIP 22Rv1 ENCFF466OXN 191 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 191 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 191 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 191 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 100 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 191 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 191 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 191 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 139 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 191 bp overlap
ChIP A673 ENCFF123WOM 191 bp overlap
ChIP A673 ENCFF123WOM 117 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 191 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 154 bp overlap
ChIP BL41 GSE31485.CTCF.BL41 120 bp overlap
ChIP C4-2B ENCFF821XVN 191 bp overlap
ChIP C4-2B ENCFF821XVN 191 bp overlap
ChIP C4-2B ENCFF821XVN 90 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 191 bp overlap
ChIP Caco-2 ENCFF753NZV 191 bp overlap
ChIP Caco-2 ENCFF934QYS 190 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 164 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 135 bp overlap
ChIP DOHH2 ENCFF637WNW 191 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 191 bp overlap
ChIP DU145 GSE121021.CTCF.DU145 167 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 191 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 154 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 191 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 177 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 191 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 191 bp overlap
ChIP GM06990 ENCFF471OQT 191 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 191 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 191 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 191 bp overlap
ChIP GM12864 ENCFF357DQE 191 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 167 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 160 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 176 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 116 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 139 bp overlap
ChIP GM12872 ENCFF697BYI 191 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 164 bp overlap
ChIP GM12873 ENCFF711LOS 191 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 190 bp overlap
ChIP GM12874 ENCFF942MTD 191 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 163 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 122 bp overlap
ChIP GM12878 ENCFF217EAX 191 bp overlap
ChIP GM12878 ENCFF485TGR 191 bp overlap
ChIP GM12878 ENCFF511URZ 188 bp overlap
ChIP GM12878 ENCFF635MMB 180 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 191 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 191 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 111 bp overlap
ChIP GM12878 ENCSR000AKB.CTCF.GM12878 150 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 109 bp overlap
ChIP GM13976 ENCFF896BYT 151 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 191 bp overlap
ChIP GM23338 ENCFF531QOI 191 bp overlap
ChIP GM23338 ENCFF772DML 138 bp overlap
ChIP GM23338 ENCFF832KWE 191 bp overlap
ChIP H1 ENCFF414GZI 191 bp overlap
ChIP H1 ENCFF764RHO 148 bp overlap
ChIP H9 ENCFF152GTF 191 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 191 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 191 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 191 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 191 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 191 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 188 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 191 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 191 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 191 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 191 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 191 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 191 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 191 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 191 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 191 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 191 bp overlap
ChIP HCT-116 GSE92879.CTCF.HCT-116 191 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 180 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 191 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 191 bp overlap
ChIP HCT116 ENCFF003KHP 191 bp overlap
ChIP HCT116 ENCFF209YMI 191 bp overlap
ChIP HCT116 ENCFF373YMA 191 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 98 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 87 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 82 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 191 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 116 bp overlap
ChIP HEK293 ENCFF498RMM 191 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 171 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 191 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 191 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 119 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 191 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 191 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 191 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 191 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 191 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 191 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 191 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 191 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 191 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 191 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 191 bp overlap
ChIP HeLa-S3 ENCFF565UFR 155 bp overlap
ChIP HeLa-S3 ENCFF626XQK 191 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 191 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 185 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 152 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 191 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 191 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 191 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 191 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 191 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 191 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 191 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 191 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 191 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 160 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 173 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 136 bp overlap
ChIP HepG2 ENCFF348BUL 191 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 191 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 191 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 112 bp overlap
ChIP Ishikawa ENCSR000BQE.CTCF.Ishikawa 186 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 183 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 164 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 171 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 137 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 155 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 191 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 166 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 152 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 141 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 191 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 97 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 131 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 177 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 153 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 151 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 166 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 172 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 157 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 143 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 171 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 191 bp overlap
ChIP KMS-11 ENCFF853JKX 191 bp overlap
ChIP KMS-11 ENCFF853JKX 191 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 164 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 131 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 190 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 154 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 191 bp overlap
ChIP Loucy ENCFF359TVQ 191 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 191 bp overlap
ChIP MCF 10A ENCFF988BGF 191 bp overlap
ChIP MCF 10A ENCFF988BGF 72 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 191 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 115 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 191 bp overlap
ChIP MCF-7 ENCFF139NQI 191 bp overlap
ChIP MCF-7 ENCFF162GNE 191 bp overlap
ChIP MCF-7 ENCFF198DQX 191 bp overlap
ChIP MCF-7 ENCFF210JUZ 191 bp overlap
ChIP MCF-7 ENCFF210JUZ 105 bp overlap
ChIP MCF-7 ENCFF494VXA 191 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 191 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 191 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 191 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 191 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 182 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 112 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 130 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 191 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 191 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 191 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 178 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 191 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 191 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 191 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 165 bp overlap
ChIP MCF-7_tamoxifen-resistant GSE118711.CTCF.MCF-7_tamoxifen-resistant 174 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 166 bp overlap
ChIP MM.1S ENCFF869JMQ 191 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 191 bp overlap
ChIP NB4 ENCFF155DNY 191 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 185 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 190 bp overlap
ChIP NCI-H929 ENCFF305JAB 191 bp overlap
ChIP NCI-H929 ENCFF305JAB 136 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 191 bp overlap
ChIP OCI-LY1 ENCFF455ESK 191 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 191 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 188 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 152 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 191 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 191 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 191 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 191 bp overlap
ChIP PC-3 ENCFF487TUI 191 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 191 bp overlap
ChIP PC-9 ENCFF539ULB 191 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 135 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 191 bp overlap
ChIP RWPE2 ENCFF911IEE 191 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 119 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 191 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 188 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 177 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 136 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 159 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 131 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 136 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 191 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 190 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 191 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 114 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 191 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 179 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 190 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 160 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 191 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 191 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 187 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 191 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 178 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 169 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 191 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 185 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 158 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 191 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 133 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 191 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 191 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 145 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 146 bp overlap
ChIP VU-SCC-147 GSE143026.CTCF.VU-SCC-147 166 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 185 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 188 bp overlap
ChIP WA09 GSE105028.CTCF.WA09 181 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 191 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 154 bp overlap
ChIP brain ENCFF163BBN 191 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 191 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 191 bp overlap
ChIP chondrocyte ENCFF134ORZ 191 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 191 bp overlap
ChIP endodermal cell ENCFF471YCZ 191 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 191 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 165 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 191 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 191 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 128 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 145 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 145 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 191 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 161 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 191 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 148 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 191 bp overlap
ChIP hepatocyte ENCFF263BLJ 191 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 168 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 174 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 191 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 191 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 191 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 191 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 191 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 191 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 176 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 191 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 191 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 118 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 191 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 191 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 191 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 191 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 149 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 191 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 170 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 191 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 191 bp overlap
ChIP neural crest cell ENCFF182LWK 191 bp overlap
ChIP neural progenitor cell ENCFF420RBO 191 bp overlap
ChIP neural progenitor cell ENCFF581WPG 191 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 191 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 162 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 187 bp overlap
ChIP placenta ENCFF029PHY 191 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 191 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 191 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 191 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 191 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 191 bp overlap
ChIP smooth muscle cell ENCFF656FBT 191 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 164 bp overlap
ChIP thyroid gland ENCFF163TUI 191 bp overlap
ChIP thyroid gland ENCFF204HWS 191 bp overlap
ChIP thyroid gland ENCFF300RYK 191 bp overlap
ChIP thyroid gland ENCFF631QRY 191 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 191 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 191 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 191 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 191 bp overlap
ChIP tibial-nerve ENCSR689VEF.CTCF.tibial-nerve 145 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 191 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 139 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 191 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 191 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 191 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 191 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 191 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 191 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 191 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 191 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 191 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 191 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 95 bp overlap
NR1I2 1 dataset
Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap
RAD21 49 datasets
ChIP GM12878 ENCFF101UQZ 187 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 173 bp overlap
ChIP H1 ENCFF698EWO 174 bp overlap
ChIP H1 ENCFF967OJF 86 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 191 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 191 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 146 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 191 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 191 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 191 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 191 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 191 bp overlap
ChIP HCT116 ENCFF568PEO 191 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 191 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 191 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 137 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 191 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 142 bp overlap
ChIP Ishikawa ENCFF570JVV 127 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 191 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 74 bp overlap
ChIP MCF-7 ENCFF694KOM 191 bp overlap
ChIP MCF-7 ENCFF724VCQ 191 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 191 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 191 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 188 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 191 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 150 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 117 bp overlap
ChIP SK-N-SH ENCFF747MAS 191 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 188 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 127 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 174 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 180 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 172 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 191 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 191 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 191 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 180 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 191 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 180 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 177 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 184 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 191 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 182 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 185 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 191 bp overlap
RXRA::VDR 1 dataset
Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 83 bp overlap
SMC1 3 datasets
ChIP DKO GSE131606.SMC1.DKO 191 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 191 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 172 bp overlap
SMC1A 3 datasets
ChIP A-549 GSE76893.SMC1A.A-549 187 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 165 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 138 bp overlap
SMC3 8 datasets
ChIP GP5D GSE51234.SMC3.GP5D 183 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 191 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 191 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 191 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 191 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 191 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 125 bp overlap
ChIP HeLa-S3 ENCFF992MML 191 bp overlap
SRF 1 dataset
ChIP MCF-7 ENCSR000BVA.SRF.MCF-7 151 bp overlap
STAG1 7 datasets
ChIP HeLa GSE126990.STAG1.HeLa 191 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 191 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 176 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 139 bp overlap
ChIP HepG2 ENCFF843EBZ 191 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 191 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 191 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 56 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 160 bp overlap
ZKSCAN1 1 dataset
Motif DE_12h DE_12h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Huangfu Lab · Publications · Resources · Contact