chr12 : 43,815,351 43,815,696
345 bp 23 TFs 1 linked gene
This 345 bp open chromatin element is linked to TWF1 and is bound by 23 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TWF1 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:43,810,351 – 43,820,696
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 3 datasets
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 268 bp overlap
ChIP prostate_1239_T GSE130408.AR.prostate_1239_T 109 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 308 bp overlap
BRD4 1 dataset
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 302 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 134 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 91 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 249 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 166 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 152 bp overlap
ESR1 2 datasets
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 58 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 177 bp overlap
EZH2 2 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 231 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 67 bp overlap
FOXA1 6 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 345 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 302 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 238 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 138 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 345 bp overlap
ChIP prostate_P29_T GSE130408.FOXA1.prostate_P29_T 139 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 124 bp overlap
ChIP DE DE-FOXA2-1 345 bp overlap
ChIP DE DE-FOXA2-2 345 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 111 bp overlap
HOXB13 10 datasets
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 146 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 110 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 199 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 185 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 208 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 292 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 212 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 174 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 329 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 317 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 232 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 58 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 77 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 286 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 296 bp overlap
SETX 1 dataset
ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 77 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 230 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 159 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 176 bp overlap
YY1 1 dataset
ChIP HEK293 ENCFF734SBY 163 bp overlap