chr12 : 19,322,274 19,322,684
410 bp 24 TFs 1 linked gene
This 410 bp open chromatin element is linked to PLEKHA5 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PLEKHA5 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:19,317,274 – 19,327,684
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 319 bp overlap
CRX 1 dataset
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 186 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 279 bp overlap
ESR1 1 dataset
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 131 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 401 bp overlap
ChIP DE DE-FOXA2-2 337 bp overlap
GATA2 3 datasets
ChIP VCaP GSE125236.GATA2.VCaP 159 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 210 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 188 bp overlap
GATA3 3 datasets
ChIP Kelly GSE65664.GATA3.Kelly 211 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 384 bp overlap
ChIP SK-N-SH ENCFF040SSB 354 bp overlap
GATA4 8 datasets
ChIP A-549 GSE85002.GATA4.A-549 169 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 289 bp overlap
ChIP DE DE-GATA4-1 410 bp overlap
ChIP DE DE-GATA4-2 410 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 410 bp overlap
ChIP foregut GSE117136.GATA4.foregut 352 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 385 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 238 bp overlap
GATA6 10 datasets
ChIP AGS GSE51705.GATA6.AGS 375 bp overlap
ChIP AGS GSE51936.GATA6.AGS 108 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 119 bp overlap
ChIP DE DE-GATA6-1 410 bp overlap
ChIP DE DE-GATA6-2 410 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 371 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 410 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 410 bp overlap
ChIP foregut GSE117136.GATA6.foregut 350 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 397 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 356 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 88 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 131 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 410 bp overlap
MYCN 1 dataset
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 164 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 188 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 62 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 78 bp overlap
ONECUT2 2 datasets
ChIP A-549 GSE102599.ONECUT2.A-549 410 bp overlap
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 76 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 362 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 176 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 410 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 375 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 349 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 130 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 275 bp overlap