chr12 : 19,139,678 19,140,097
419 bp 31 TFs 2 linked genes
This 419 bp open chromatin element is linked to ENSG00000253284 and PLEKHA5 and is bound by 31 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000253284 7.0 kb Proximal Proximity
PLEKHA5 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:19,134,678 – 19,145,097
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 406 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 166 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 166 bp overlap
EZH2 1 dataset
ChIP hepatocyte ENCFF118DKH 339 bp overlap
FOXA1 1 dataset
ChIP liver ERP002306.FOXA1.liver 125 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 195 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 148 bp overlap
ChIP DE DE-FOXA2-1 396 bp overlap
ChIP DE DE-FOXA2-2 419 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 419 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 315 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 169 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 293 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 208 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 146 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 212 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 320 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 419 bp overlap
ChIP DE DE-GATA4-2 419 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 419 bp overlap
ChIP foregut GSE117136.GATA4.foregut 383 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 419 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 346 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 366 bp overlap
ChIP AGS GSE51936.GATA6.AGS 137 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 167 bp overlap
ChIP DE DE-GATA6-1 406 bp overlap
ChIP DE DE-GATA6-2 419 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 409 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 358 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 419 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 380 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 409 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 388 bp overlap
ChIP foregut GSE117136.GATA6.foregut 387 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 337 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 238 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 327 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 223 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 228 bp overlap
JUND 1 dataset
ChIP liver ENCSR837GTK.JUND.liver 177 bp overlap
ONECUT2 2 datasets
ChIP A-549 GSE102599.ONECUT2.A-549 328 bp overlap
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 180 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 356 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 269 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 197 bp overlap
PGR 1 dataset
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 103 bp overlap
RBFOX2 1 dataset
ChIP K-562 GSE120104.RBFOX2.K-562 186 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 276 bp overlap
ChIP HGrC1_C134W-TGF_SMAD4-KO GSE138496.SMAD2-3.HGrC1_C134W-TGF_SMAD4-KO 85 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 113 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 419 bp overlap
SMAD4 3 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 212 bp overlap
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 208 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 63 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 120 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 138 bp overlap
SMARCA4 7 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 59 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 72 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 86 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 294 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 283 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 271 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 154 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 419 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 147 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 256 bp overlap