chr12 : 7,639,859 7,640,636
777 bp 28 TFs 5 linked genes
This 777 bp open chromatin element is linked to 5 target genes and is bound by 28 transcription factors.
Linked Genes
5 genes
Link type
Gene Expression Dist. to TSS Distance Link type
GDF3 55.4 kb Distal Multiome
NANOG 147.4 kb Distal Multiome
SLC2A14 232.9 kb Distal Multiome
SLC2A3 295.8 kb Distal Multiome
PEX5 451.7 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:7,634,859 – 7,645,636
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 67 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 83 bp overlap
CDK7 4 datasets
ChIP Jurkat GSE50622.CDK7.Jurkat 90 bp overlap
ChIP Jurkat GSE83777.CDK7.Jurkat 76 bp overlap
ChIP Jurkat_DMSO GSE60027.CDK7.Jurkat_DMSO 73 bp overlap
ChIP Jurkat_THZ2102 GSE60027.CDK7.Jurkat_THZ2102 127 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 331 bp overlap
CTCF 2 datasets
ChIP adrenal gland ENCFF678WUB 306 bp overlap
ChIP uterus ENCFF466ZUR 305 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 289 bp overlap
E2F6 1 dataset
ChIP H1 ENCFF785DWK 274 bp overlap
ETS1 4 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 55 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 131 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 111 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 92 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 290 bp overlap
ChIP DE DE-FOXA2-2 276 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 58 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 334 bp overlap
ChIP DE DE-GATA4-2 368 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 283 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 240 bp overlap
MED1 1 dataset
ChIP Jurkat GSE59657.MED1.Jurkat 95 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 90 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 66 bp overlap
MYC 1 dataset
ChIP Jurkat GSE83777.MYC.Jurkat 69 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCFF340KVJ 348 bp overlap
NFYB 5 datasets
ChIP GM12878 ENCFF474DNH 381 bp overlap
ChIP GM12878 ENCFF474DNH 203 bp overlap
ChIP GM12878 ENCSR000DNM.NFYB.GM12878 205 bp overlap
ChIP HepG2 ENCFF174VYX 270 bp overlap
ChIP WTC11 ENCFF751ZTQ 391 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 109 bp overlap
POLR2A 9 datasets
ChIP GM23338 ENCFF450WCS 444 bp overlap
ChIP Peyer's patch ENCFF990IYL 405 bp overlap
ChIP body of pancreas ENCFF084VJR 471 bp overlap
ChIP body of pancreas ENCFF501FEC 401 bp overlap
ChIP body of pancreas ENCFF675RCN 396 bp overlap
ChIP body of pancreas ENCFF727UBE 437 bp overlap
ChIP spleen ENCFF044PYR 242 bp overlap
ChIP spleen ENCFF446ZGT 282 bp overlap
ChIP spleen ENCFF706IUS 331 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 603 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 777 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 122 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 109 bp overlap
RUNX2 2 datasets
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 118 bp overlap
ChIP PER-117 GSE151819.RUNX2.PER-117 88 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 551 bp overlap
SP1 4 datasets
ChIP GM12878 ENCFF620LDJ 321 bp overlap
ChIP GM12878 ENCSR000BHK.SP1.GM12878 119 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 138 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 117 bp overlap
TBP 4 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP H1 ENCFF859IIO 313 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 130 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 64 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 319 bp overlap
ZFX 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 67 bp overlap