chr1 : 205,840,600 205,841,139
539 bp 23 TFs 1 linked gene
This 539 bp open chromatin element is linked to PM20D1 and is bound by 23 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PM20D1 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:205,835,600 – 205,846,139
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_8 GSE104399.AR.breast_tumor_Male_8 192 bp overlap
BACH1 1 dataset
ChIP AsPC-1 GSE124406.BACH1.AsPC-1 201 bp overlap
BRD4 3 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 168 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 162 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 468 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 293 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 162 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 231 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 142 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 181 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 113 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 95 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 539 bp overlap
ChIP DE DE-GATA4-2 539 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 77 bp overlap
ChIP DE DE-GATA6-2 539 bp overlap
ChIP foregut GSE117136.GATA6.foregut 200 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 106 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 165 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 261 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 170 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 238 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 132 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 256 bp overlap
ChIP K562 ENCFF455EEO 332 bp overlap
MYC 1 dataset
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 161 bp overlap
MYCN 1 dataset
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 163 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 153 bp overlap
ChIP K562 ENCFF047YKA 295 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 429 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 111 bp overlap
TAL1 1 dataset
ChIP CD34 GSE52924.TAL1.CD34 115 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 471 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 531 bp overlap