chr11 : 110,299,121 – 110,299,380
259 bp 34 TFs 1 linked gene
This 259 bp open chromatin element is linked to RDX and is bound by 34 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RDX 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:110,294,121 – 110,304,380
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 259 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 211 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 210 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 57 bp overlap
EP300 1 dataset
ChIP MCF-7 ENCFF508OAU 259 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 153 bp overlap
ESR1 52 datasets
ChIP MCF-7 ENCFF004AKH 259 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 259 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 259 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 259 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 250 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 240 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 207 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 203 bp overlap
ChIP MCF-7 GSE117492.ESR1.MCF-7 157 bp overlap
ChIP MCF-7L_t0 GSE108787.ESR1.MCF-7L_t0 204 bp overlap
ChIP MCF-7L_t1 GSE108787.ESR1.MCF-7L_t1 148 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.ESR1.MCF-7_ARID1A-KO 259 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 259 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 259 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_clone14 259 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 222 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 259 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 259 bp overlap
ChIP MCF-7_DMSO GSE148277.ESR1.MCF-7_DMSO 242 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 224 bp overlap
ChIP MCF-7_E2 GSE108883.ESR1.MCF-7_E2 238 bp overlap
ChIP MCF-7_E2 GSE86538.ESR1.MCF-7_E2 201 bp overlap
ChIP MCF-7_E2 GSE71276.ESR1.MCF-7_E2 126 bp overlap
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 103 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 151 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 113 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 194 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 94 bp overlap
ChIP MCF-7_E2_30min GSE108883.ESR1.MCF-7_E2_30min 121 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 117 bp overlap
ChIP MCF-7_E2_90min GSE109820.ESR1.MCF-7_E2_90min 216 bp overlap
ChIP MCF-7_E2_Dex GSE81510.ESR1.MCF-7_E2_Dex 131 bp overlap
ChIP MCF-7_ESR1_wildtype GSE100074.ESR1.MCF-7_ESR1_wildtype 198 bp overlap
ChIP MCF-7_Fulvestrant_HC11 GSE102882.ESR1.MCF-7_Fulvestrant_HC11 202 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 259 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 104 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 190 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 258 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 254 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 259 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 50 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 259 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 104 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 217 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 224 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 259 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 208 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 259 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 259 bp overlap
ChIP MCF-7_shCtrl GSE125594.ESR1.MCF-7_shCtrl 192 bp overlap
ChIP MCF-7_shCtrl_TamR GSE128445.ESR1.MCF-7_shCtrl_TamR 257 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 191 bp overlap
ESR1_D538G 3 datasets
ChIP MCF-7_E2 GSE94493.ESR1_D538G.MCF-7_E2 247 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_D538G.MCF-7_dox 249 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_D538G.MCF-7_dox_E2 259 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 141 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 143 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 256 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 244 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 218 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 259 bp overlap
FOXA1 4 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 146 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 85 bp overlap
ChIP MCF-7_1117 GSE124667.FOXA1.MCF-7_1117 189 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 77 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 259 bp overlap
ChIP DE DE-FOXA2-2 250 bp overlap
FOXM1 1 dataset
ChIP MCF-7 ENCFF363FKA 259 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF437NQS 140 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 98 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 259 bp overlap
ChIP DE DE-GATA4-2 259 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 259 bp overlap
ChIP DE DE-GATA6-2 259 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 254 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 259 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 250 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 259 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 87 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 247 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 167 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 196 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 193 bp overlap
RFX1 1 dataset
ChIP K562 ENCFF809XVG 121 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 216 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 259 bp overlap
SMAD3 1 dataset
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 240 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 83 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 242 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 259 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 104 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 60 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 59 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 169 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 144 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 212 bp overlap
TEAD4 6 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 108 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 259 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 259 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 259 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 259 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 218 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 174 bp overlap
YY1AP1 5 datasets
ChIP MCF-7_E2 GSE125594.YY1AP1.MCF-7_E2 215 bp overlap
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 259 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 128 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 256 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 229 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 187 bp overlap
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