chr11 : 103,987,340 – 103,987,939
599 bp 35 TFs 0 linked genes
This 599 bp open chromatin element has no linked target genes and is bound by 35 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:103,982,340 – 103,992,939
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 88 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 272 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CTCF 59 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 86 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 120 bp overlap
ChIP A673 ENCFF123WOM 147 bp overlap
ChIP C4-2B ENCFF821XVN 65 bp overlap
ChIP C4-2B ENCFF821XVN 56 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 76 bp overlap
ChIP GM10248 ENCFF083HVS 165 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 95 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 82 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 70 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 163 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 108 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 108 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 77 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 207 bp overlap
ChIP HFFc6 ENCFF005CJI 186 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 100 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 163 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 59 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 145 bp overlap
ChIP LNCAP ENCFF223HIG 150 bp overlap
ChIP LNCAP ENCFF700QXT 163 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 233 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 103 bp overlap
ChIP Loucy ENCFF359TVQ 102 bp overlap
ChIP MCF-7 ENCFF210JUZ 140 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 68 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 114 bp overlap
ChIP OCI-LY1 ENCFF455ESK 161 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 125 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 337 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 88 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 143 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 207 bp overlap
ChIP Panc1 ENCFF056JQX 314 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 145 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 195 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 191 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 149 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 142 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 73 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 153 bp overlap
ChIP brain ENCFF163BBN 183 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 143 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 152 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 178 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 132 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 208 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 231 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 84 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 92 bp overlap
ChIP islet ERP004003.CTCF.islet 150 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 109 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 128 bp overlap
ChIP neural cell ENCFF335ADI 166 bp overlap
ChIP osteoblast ENCFF491ZJZ 123 bp overlap
ChIP placenta ENCFF029PHY 143 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 127 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 120 bp overlap
FOXA1 2 datasets
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 99 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 75 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 107 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 107 bp overlap
KLF13 2 datasets
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
Motif ES_0h ES_0h-KLF13_MA0657.2 17 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 193 bp overlap
KLF6 2 datasets
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
Motif ES_0h ES_0h-KLF6_MA1517.2 9 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 173 bp overlap
Lhx3 1 dataset
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
MAFK 1 dataset
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Mafg 1 dataset
Motif ES_0h ES_0h-Mafg_MA0659.4 12 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 236 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 217 bp overlap
POU2F1::SOX2 1 dataset
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 3 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 124 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 589 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 351 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 230 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 96 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 59 bp overlap
RORC 1 dataset
Motif ES_0h ES_0h-RORC_MA1151.2 10 bp overlap
RUNX3 1 dataset
Motif ES_0h ES_0h-RUNX3_MA0684.3 8 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 199 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 173 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 112 bp overlap
ChIP neural cell ENCFF795YGY 204 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SP3 2 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP9 2 datasets
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
STAT1 1 dataset
ChIP THP-1_IFNb GSE128111.STAT1.THP-1_IFNb 166 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 296 bp overlap
ZIM3 2 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF449 1 dataset
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
Zfp335 4 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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