chr1 : 184,244,558 184,245,746
1,188 bp 42 TFs 2 linked genes
This 1.2 kb open chromatin element is linked to C1orf21 and TSEN15 and is bound by 42 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
C1orf21 141.8 kb Distal Multiome
TSEN15 193.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:184,239,558 – 184,250,746
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ATF2 1 dataset
Motif DE_72h DE_72h-ATF2_MA1632.2 10 bp overlap
CTCF 2 datasets
ChIP endodermal cell ENCFF471YCZ 224 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 278 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 165 bp overlap
ChIP hESC GSE26097.EOMES.hESC 169 bp overlap
FOS 1 dataset
Motif DE_72h DE_72h-FOS_MA1951.2 13 bp overlap
FOS::JUN 1 dataset
Motif DE_72h DE_72h-FOSJUN_MA1126.2 10 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 1188 bp overlap
ChIP DE DE-FOXA2-2 1188 bp overlap
FOXH1 1 dataset
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 1188 bp overlap
ChIP DE DE-GATA4-2 1188 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 296 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 765 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 189 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 272 bp overlap
ChIP DE DE-GATA6-1 1188 bp overlap
ChIP DE DE-GATA6-2 1188 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 850 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 946 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 1188 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1188 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 893 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 875 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 827 bp overlap
ChIP foregut GSE117136.GATA6.foregut 257 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 697 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 300 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 201 bp overlap
HSF4 1 dataset
Motif DE_72h DE_72h-HSF4_MA0771.1 13 bp overlap
JUN 3 datasets
Motif DE_72h DE_72h-JUN_MA0488.2 10 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 375 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 373 bp overlap
JUND 1 dataset
Motif DE_72h DE_72h-JUND_MA0492.2 11 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 217 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NFATC3 1 dataset
Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap
Nfat5 1 dataset
Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap
Olig2 1 dataset
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 142 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 346 bp overlap
SIX1 1 dataset
Motif DE_72h DE_72h-SIX1_MA1118.2 9 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 279 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 248 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1163 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 895 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 716 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 563 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 1016 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 398 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 924 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1157 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 200 bp overlap
SMAD4 2 datasets
ChIP endoderm GSE29422.SMAD4.endoderm 265 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 241 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 809 bp overlap
SOX17_M 2 datasets
ChIP DE_D2 DED2-SOX17-M_Batch_II 129 bp overlap
ChIP DE_D2 DED2-SOX17-M_Batch_II 633 bp overlap
SREBF1 1 dataset
Motif DE_72h DE_72h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_72h DE_72h-SREBF2_MA0596.1 10 bp overlap
THRB 1 dataset
Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap
TOP2A 1 dataset
ChIP K-562_pBQ GSE79593.TOP2A.K-562_pBQ 129 bp overlap
Tcf12 1 dataset
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
ZNF157 1 dataset
Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap
ZNF75D 1 dataset
Motif DE_72h DE_72h-ZNF75D_MA1601.2 12 bp overlap
Zfx 1 dataset
Motif DE_72h DE_72h-Zfx_MA0146.3 10 bp overlap