chr9 : 87,644,210 87,644,810
600 bp 39 TFs 0 linked genes
This 600 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:87,639,210 – 87,649,810
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 55 bp overlap
BRD4 2 datasets
ChIP RH4 GSE83726.BRD4.RH4 267 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 187 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 332 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 207 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 427 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 154 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 144 bp overlap
FOS 5 datasets
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 78 bp overlap
ChIP MCF-7 ENCFF282FWZ 123 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 143 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 73 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 69 bp overlap
FOSL2 4 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 109 bp overlap
ChIP A549 ENCFF195CES 120 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 104 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 80 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 600 bp overlap
ChIP DE DE-FOXA2-2 600 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 52 bp overlap
ChIP DE DE-GATA4-1 600 bp overlap
ChIP DE DE-GATA4-2 600 bp overlap
ChIP foregut GSE117136.GATA4.foregut 229 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 431 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 161 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 276 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 600 bp overlap
ChIP DE DE-GATA6-2 600 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 565 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 600 bp overlap
ChIP foregut GSE117136.GATA6.foregut 451 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 213 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 123 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 494 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 355 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 284 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 135 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 193 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 202 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 68 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 65 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 298 bp overlap
JUND 2 datasets
ChIP H1 ENCFF010YXS 110 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 90 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 145 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 198 bp overlap
KMT2A 1 dataset
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 415 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 158 bp overlap
MAFF 2 datasets
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 148 bp overlap
ChIP HepG2 ENCFF452YUT 277 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 379 bp overlap
ChIP K562 ENCFF455EEO 416 bp overlap
MAFK 7 datasets
ChIP A549 ENCFF371EPR 381 bp overlap
ChIP H1 ENCFF854XWE 285 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 244 bp overlap
ChIP HepG2 ENCFF743ZOF 241 bp overlap
ChIP HepG2 ENCFF767LDG 257 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 245 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 318 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 600 bp overlap
NANOG 3 datasets
ChIP WA01 ERP004238.NANOG.WA01 122 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 159 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 63 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 93 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 151 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 246 bp overlap
RELA 6 datasets
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 94 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 93 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 106 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 93 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 70 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 58 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 278 bp overlap
SMARCA4 4 datasets
ChIP NSC GSE125033.SMARCA4.NSC 205 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 215 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 449 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 402 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 479 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 138 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 330 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 281 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 201 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 201 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 506 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 183 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 152 bp overlap