chr1 : 178,033,086 – 178,033,488
402 bp 30 TFs 2 linked genes
This 402 bp open chromatin element is linked to CRYZL2P and CRYZL2P-SEC16B and is bound by 30 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CRYZL2P 4.5 kb Proximal Proximity
CRYZL2P-SEC16B 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:178,028,086 – 178,038,488
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
AR 9 datasets
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 165 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 166 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 215 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 191 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 102 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 157 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 245 bp overlap
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 296 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 62 bp overlap
ARID1A 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 168 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 244 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 174 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 128 bp overlap
CEBPA 3 datasets
ChIP T-47D GSE132649.CEBPA.T-47D 259 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 363 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 268 bp overlap
CEBPB 2 datasets
ChIP MCF-7 ENCFF772ZTQ 277 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 151 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 275 bp overlap
CTCF 1 dataset
ChIP HT-1080 GSE135580.CTCF.HT-1080 107 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 220 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 306 bp overlap
ESR1 15 datasets
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 202 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 199 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 79 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 201 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 54 bp overlap
ChIP breast-cancer_S440-2187 GSE128018.ESR1.breast-cancer_S440-2187 161 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 76 bp overlap
ChIP breast_tumor_Female_2 GSE104399.ESR1.breast_tumor_Female_2 162 bp overlap
ChIP breast_tumor_Male_1 GSE104399.ESR1.breast_tumor_Male_1 137 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 402 bp overlap
ChIP breast_tumor_Male_15 GSE104399.ESR1.breast_tumor_Male_15 184 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 353 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 398 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 316 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 171 bp overlap
ESR1_Y537S 1 dataset
ChIP T-47D_E2 GSE94493.ESR1_Y537S.T-47D_E2 118 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 236 bp overlap
ESRRA 7 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 345 bp overlap
ChIP BT-474_AICAR GSE75876.ESRRA.BT-474_AICAR 246 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 288 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 305 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 402 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 325 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 230 bp overlap
FOXA1 95 datasets
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 209 bp overlap
ChIP A1A3_EtOH GSE112491.FOXA1.A1A3_EtOH 169 bp overlap
ChIP HepG2 ENCFF740VZW 271 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 147 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 210 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 314 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 127 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 175 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 174 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 69 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 249 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 124 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 136 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 274 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 217 bp overlap
ChIP MCF-7 GSE128445.FOXA1.MCF-7 180 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 169 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 93 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 73 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 63 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 124 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 142 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 145 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 188 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 317 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 103 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 86 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 75 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 107 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 114 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 158 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 190 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 135 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 273 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 145 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 75 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 185 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 50 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 323 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 307 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 352 bp overlap
ChIP T-47D GSE72249.FOXA1.T-47D 179 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 149 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 137 bp overlap
ChIP T-47D_DEX GSE72249.FOXA1.T-47D_DEX 76 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 401 bp overlap
ChIP T-47D_E2 GSE72249.FOXA1.T-47D_E2 125 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 244 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 96 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 195 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 183 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 288 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 354 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 294 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 282 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 328 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 99 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 94 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 149 bp overlap
ChIP T47D-A1-2_Dex GSE112491.FOXA1.T47D-A1-2_Dex 205 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 188 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 238 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 230 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 390 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 376 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 402 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 391 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 307 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 371 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 167 bp overlap
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 402 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 298 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 328 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 236 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 402 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 402 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 402 bp overlap
ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 285 bp overlap
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 314 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 393 bp overlap
ChIP breast_tumor_Female_3 GSE104399.FOXA1.breast_tumor_Female_3 348 bp overlap
ChIP breast_tumor_Male_1 GSE104399.FOXA1.breast_tumor_Male_1 402 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 205 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 391 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 402 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 281 bp overlap
ChIP breast_tumor_Male_4 GSE104399.FOXA1.breast_tumor_Male_4 356 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 360 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 402 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 397 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 372 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 214 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 109 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 75 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 303 bp overlap
FOXA2 6 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 328 bp overlap
ChIP DE DE-FOXA2-1 402 bp overlap
ChIP DE DE-FOXA2-2 402 bp overlap
ChIP liver ENCFF877SFI 345 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 148 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 344 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 286 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 132 bp overlap
GATA3 2 datasets
ChIP T-47D GSE51274.GATA3.T-47D 60 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 295 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 327 bp overlap
ChIP DE DE-GATA4-2 380 bp overlap
ChIP foregut GSE117136.GATA4.foregut 282 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 248 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 159 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 332 bp overlap
ChIP DE DE-GATA6-2 297 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 211 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 95 bp overlap
GRHL2 5 datasets
ChIP HBE GSE46194.GRHL2.HBE 68 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 62 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 116 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 112 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 85 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 397 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 126 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 167 bp overlap
PAXIP1 1 dataset
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 193 bp overlap
PGR 2 datasets
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 402 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 272 bp overlap
SMARCA4 1 dataset
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 208 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 136 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 239 bp overlap
STAT3 2 datasets
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 94 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 216 bp overlap
YY1AP1 2 datasets
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 224 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 54 bp overlap
ZNF217 2 datasets
ChIP MCF-7 ENCFF379OSU 329 bp overlap
ChIP MCF-7 ENCSR465XQW.ZNF217.MCF-7 227 bp overlap
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