Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

50 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

ARNTL 1 dataset

ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 283 bp overlap

Arnt 1 dataset

Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap

BRD4 1 dataset

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 232 bp overlap

Bach1::Mafk 1 dataset

Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap

CLOCK 1 dataset

Motif DE_12h DE_12h-CLOCK_MA0819.3 7 bp overlap

Cebpa 3 datasets

ChIP BLaER1 ENCFF093OYK 212 bp overlap

ChIP BLaER1 ENCFF262VBH 79 bp overlap

ChIP BLaER1 ENCFF364PUR 260 bp overlap

Creb3l2 1 dataset

Motif DE_12h DE_12h-Creb3l2_MA0608.1 9 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 254 bp overlap

ESR1 1 dataset

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 99 bp overlap

ESR1_pS118 2 datasets

ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 82 bp overlap

ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 232 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 163 bp overlap

HES2 1 dataset

Motif DE_12h DE_12h-HES2_MA0616.3 9 bp overlap

HES5 1 dataset

Motif DE_12h DE_12h-HES5_MA0821.2 10 bp overlap

HES6 1 dataset

Motif DE_12h DE_12h-HES6_MA1493.1 10 bp overlap

HEY1 1 dataset

Motif DE_12h DE_12h-HEY1_MA0823.1 10 bp overlap

HEY2 1 dataset

Motif DE_12h DE_12h-HEY2_MA0649.2 9 bp overlap

MAF::NFE2 1 dataset

Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAX 3 datasets

Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap

ChIP H1 ENCFF914VQY 271 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 190 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MEIS3 1 dataset

Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap

MNT 1 dataset

Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap

MYC 1 dataset

Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap

MYCN 1 dataset

Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap

Mlxip 1 dataset

Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap

NANOG 3 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 115 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 427 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 263 bp overlap

Nfe2l2 1 dataset

Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap

Npas2 1 dataset

Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap

PKNOX1 1 dataset

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 167 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1 3 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 427 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 319 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RBPJ 2 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

RFX4 1 dataset

Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap

Rfx6 1 dataset

Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 126 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 229 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 286 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 198 bp overlap

TBX21 1 dataset

ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 279 bp overlap

TP53 1 dataset

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap

TP63 1 dataset

ChIP breast-organoid GSE113909.TP63.breast-organoid 81 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 210 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 188 bp overlap

XRCC5 2 datasets

ChIP K-562 ENCSR506KWJ.XRCC5.K-562 174 bp overlap

ChIP K-562 GSE120104.XRCC5.K-562 176 bp overlap

ZNF257 2 datasets

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap

ZNF449 1 dataset

Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap

ZSCAN16 1 dataset

Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap

Zfp809 2 datasets

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap

Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Genome Browser