chr9 : 26,742,828 26,743,174
346 bp 30 TFs 1 linked gene
This 346 bp open chromatin element is linked to ENSG00000254261 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000254261 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:26,737,828 – 26,748,174
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 165 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 201 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 168 bp overlap
BRD4 3 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 346 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 93 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 297 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 156 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 246 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 140 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 223 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 194 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 224 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 199 bp overlap
JUN 1 dataset
ChIP ESC S24-ESC-d0-JUN-exp1 307 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 199 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 208 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 191 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 346 bp overlap
MAX 3 datasets
ChIP H1 ENCFF601FOM 261 bp overlap
ChIP H1 ENCFF914VQY 273 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 223 bp overlap
MYC 1 dataset
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 194 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 254 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 170 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 327 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 322 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 346 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 250 bp overlap
ChIP hESC GSE18292.NANOG.hESC 128 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 245 bp overlap
POU3F1 1 dataset
ChIP SKM-1_D2 GSE93706.POU3F1.SKM-1_D2 106 bp overlap
POU3F2 1 dataset
ChIP hiPSC_SGC0946 GSE149017.POU3F2.hiPSC_SGC0946 209 bp overlap
POU5F1 17 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 343 bp overlap
ChIP GM23338 ENCFF333SNB 255 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 346 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 346 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 346 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 204 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 346 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 178 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 220 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 246 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 317 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 323 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 346 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 346 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 244 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 196 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 255 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 235 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 238 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 270 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 275 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 346 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 285 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 224 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 284 bp overlap
SOX2 11 datasets
ChIP HNSC GSE69479.SOX2.HNSC 332 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 264 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 249 bp overlap
ChIP OSvKM GSE81899.SOX2.OSvKM 346 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 251 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 194 bp overlap
ChIP hESC GSE69479.SOX2.hESC 256 bp overlap
ChIP hESC GSE18292.SOX2.hESC 148 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 306 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 248 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 235 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 346 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 196 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 237 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 212 bp overlap
ChIP WTC11 ENCFF699QGS 308 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 336 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 125 bp overlap