chr9 : 15,554,436 15,554,750
314 bp 26 TFs 1 linked gene
This 314 bp open chromatin element is linked to CCDC171 and is bound by 26 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CCDC171 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:15,549,436 – 15,559,750
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 53 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 314 bp overlap
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 209 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 314 bp overlap
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 208 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 99 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 55 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 314 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 209 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 147 bp overlap
FOXP1 1 dataset
ChIP B-cell_CD77-pos GSE114803.FOXP1.B-cell_CD77-pos 54 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 169 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 314 bp overlap
ChIP DE DE-GATA4-2 314 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 314 bp overlap
ChIP DE DE-GATA6-2 314 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 262 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 314 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 314 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 314 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 314 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 250 bp overlap
KDM1A 6 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 83 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 59 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 56 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 120 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 96 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 69 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 79 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 293 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 59 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 198 bp overlap
SETX 1 dataset
ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 206 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 314 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 93 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 170 bp overlap
ZMYM3 1 dataset
ChIP GM12878 GSE97661.ZMYM3.GM12878 75 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 290 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 76 bp overlap
ChIP HepG2 ENCFF490FFQ 160 bp overlap