Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

33 transcription factors

CRY2 1 dataset

ChIP U2OS GSE130602.CRY2.U2OS 112 bp overlap

CTCF 37 datasets

ChIP D54 ENCSR000DKN.CTCF.D54 145 bp overlap

Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

ChIP DND-41 ENCFF913MRA 188 bp overlap

ChIP DND41 ENCSR000AQU.CTCF.DND41 223 bp overlap

ChIP GM23338 ENCFF531QOI 223 bp overlap

ChIP GM23338 ENCFF772DML 197 bp overlap

ChIP H1 ENCFF414GZI 203 bp overlap

ChIP H1 ENCFF764RHO 86 bp overlap

ChIP H9 ENCFF152GTF 223 bp overlap

ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 223 bp overlap

ChIP HCT-116 GSE131606.CTCF.HCT-116 218 bp overlap

ChIP HCT116 ENCFF209YMI 195 bp overlap

ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 106 bp overlap

ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 113 bp overlap

ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 191 bp overlap

ChIP Loucy ENCFF359TVQ 223 bp overlap

ChIP Loucy ENCSR464DKE.CTCF.Loucy 223 bp overlap

ChIP MCF-7 ENCFF139NQI 223 bp overlap

ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 223 bp overlap

ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 185 bp overlap

ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 182 bp overlap

ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 149 bp overlap

ChIP PC-3 ENCSR359LOD.CTCF.PC-3 223 bp overlap

ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 161 bp overlap

ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 164 bp overlap

ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 211 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 124 bp overlap

ChIP endodermal cell ENCFF471YCZ 178 bp overlap

ChIP hESC_D0 GSE116862.CTCF.hESC_D0 173 bp overlap

ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 157 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 179 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 131 bp overlap

ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 182 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 222 bp overlap

ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 185 bp overlap

ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 197 bp overlap

ERG 2 datasets

ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 223 bp overlap

ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 223 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Irf1 1 dataset

Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap

LMO2 1 dataset

ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 80 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap

MYOD1 1 dataset

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 223 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BHE.NR3C1.A-549 127 bp overlap

PRDM1 1 dataset

Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap

RAD21 10 datasets

ChIP GM12878 ENCSR000BMY.RAD21.GM12878 104 bp overlap

ChIP H1 ENCFF698EWO 223 bp overlap

ChIP H1 ENCFF967OJF 203 bp overlap

ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 214 bp overlap

ChIP MCF-7 GSE72082.RAD21.MCF-7 148 bp overlap

ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 159 bp overlap

ChIP WA09 GSE105028.RAD21.WA09 223 bp overlap

ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 223 bp overlap

ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 143 bp overlap

ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 186 bp overlap

RELA 2 datasets

ChIP KB_IL GSE52469.RELA.KB_IL 93 bp overlap

ChIP KB_IL GSE52469.RELA.KB_IL 75 bp overlap

RUNX1 1 dataset

ChIP THP-1 GSE79899.RUNX1.THP-1 223 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 223 bp overlap

Runx1 1 dataset

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

SMC1 1 dataset

ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 130 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SPI1 2 datasets

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 182 bp overlap

ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 210 bp overlap

STAG1 4 datasets

ChIP HeLa GSE126990.STAG1.HeLa 223 bp overlap

ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 223 bp overlap

ChIP MCF-7 ERP000209.STAG1.MCF-7 134 bp overlap

ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 139 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Stat2 1 dataset

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

TAL1 1 dataset

ChIP MOLT-3 GSE59657.TAL1.MOLT-3 133 bp overlap

TCF3 1 dataset

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 145 bp overlap

YY1 1 dataset

ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 91 bp overlap

ZNF189 1 dataset

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 202 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 223 bp overlap

ZNF490 1 dataset

ChIP HEK293 GSE76494.ZNF490.HEK293 112 bp overlap

ZNF675 1 dataset

Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap

Genome Browser