chr8 : 48,516,974 48,518,054
1,080 bp 34 TFs 1 linked gene
This 1.1 kb open chromatin element is linked to LINC02947 and is bound by 34 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02947 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:48,511,974 – 48,523,054
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
BCL6 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 350 bp overlap
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 311 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 156 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 193 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 333 bp overlap
BRD4 4 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 253 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 451 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 251 bp overlap
CHD2 1 dataset
ChIP GM12878 ENCFF697XCL 99 bp overlap
CREBBP 4 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 93 bp overlap
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 509 bp overlap
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 187 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 832 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 266 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 665 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF692SMY 112 bp overlap
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 80 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 280 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 257 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 327 bp overlap
ChIP DE DE-FOXA2-1 284 bp overlap
ChIP DE DE-FOXA2-2 427 bp overlap
FOXP1 1 dataset
ChIP B-cell_CD77-pos GSE114803.FOXP1.B-cell_CD77-pos 273 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 227 bp overlap
ChIP DE DE-GATA4-1 565 bp overlap
ChIP DE DE-GATA4-1 401 bp overlap
ChIP DE DE-GATA4-2 1080 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 368 bp overlap
ChIP DE DE-GATA6-1 351 bp overlap
ChIP DE DE-GATA6-2 1080 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 460 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 332 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 337 bp overlap
ChIP GM12878 ENCFF824TGK 362 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCFF918AID 312 bp overlap
MEF2B 2 datasets
ChIP tonsil GSE110682.MEF2B.tonsil 183 bp overlap
ChIP tonsil GSE110682.MEF2B.tonsil 775 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 155 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCFF340KVJ 65 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 193 bp overlap
POLR2A 1 dataset
ChIP GM12891 ENCFF012SUT 565 bp overlap
RELA 1 dataset
ChIP GM12891 ENCSR000EAI.RELA.GM12891 150 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 129 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 213 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 339 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 74 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 249 bp overlap
SOX17_M 2 datasets
ChIP DE_D2 DED2-SOX17-M_Batch_II 287 bp overlap
ChIP DE_D2 DED2-SOX17-M_Batch_II 306 bp overlap
SPI1 5 datasets
ChIP EM-3 GSE128834.SPI1.EM-3 53 bp overlap
ChIP GM12878 ENCFF134LCP 87 bp overlap
ChIP GM12891 ENCFF563IUT 95 bp overlap
ChIP K562 ENCFF410ORC 92 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 58 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 283 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 287 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 175 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 258 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 334 bp overlap