chr1 : 160,177,536 160,177,938
402 bp 36 TFs 1 linked gene
This 402 bp open chromatin element is linked to ATP1A4 and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ATP1A4 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:160,172,536 – 160,182,938
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.AR.breast_tumor_Male_28 81 bp overlap
CREBBP 1 dataset
ChIP retina_Hu29 GSE137311.CREBBP.retina_Hu29 353 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 259 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 228 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 402 bp overlap
CTCF 4 datasets
ChIP Kasumi-1_siRE GSE121280.CTCF.Kasumi-1_siRE 140 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 160 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 278 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 316 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 402 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF432UGA 90 bp overlap
ChIP GM12878 ENCFF692SMY 77 bp overlap
ESR1 8 datasets
ChIP T-47D GSE148277.ESR1.T-47D 162 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 64 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 169 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 228 bp overlap
ChIP breast-cancer_S176 GSE128018.ESR1.breast-cancer_S176 230 bp overlap
ChIP breast-cancer_S177 GSE128018.ESR1.breast-cancer_S177 55 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 245 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 238 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 231 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 209 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 263 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCFF867JAR 140 bp overlap
GATA3 2 datasets
ChIP T-47D ENCSR000BMX.GATA3.T-47D 61 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 141 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 402 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 382 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 63 bp overlap
ChIP foregut GSE117136.GATA6.foregut 160 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 271 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 181 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 249 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 91 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 402 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 186 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 363 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 402 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 228 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 158 bp overlap
NR2C2 2 datasets
ChIP K562 ENCFF750AXF 209 bp overlap
ChIP K562 ENCFF750AXF 402 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 173 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 343 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 213 bp overlap
RELA 1 dataset
ChIP GM12878 ENCSR664POU.RELA.GM12878 148 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR138FUZ.RNF2.K-562 122 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 303 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 355 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 228 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 75 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 192 bp overlap
YY1AP1 1 dataset
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 80 bp overlap
ZFX 1 dataset
ChIP K-562 ENCSR920ASP.ZFX.K-562 66 bp overlap
ZFY 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFY.HEK293T_22Rv1 322 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 141 bp overlap
ZNF687 3 datasets
ChIP GM12878 ENCFF233SGE 55 bp overlap
ChIP GM12878 ENCFF233SGE 274 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 74 bp overlap