chr7 : 125,386,134 – 125,386,628

494 bp 51 TFs 0 linked genes

This 494 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

51 transcription factors

ARID1B 1 dataset

ChIP K-562 ENCSR822CCM.ARID1B.K-562 223 bp overlap

Atoh1 1 dataset

Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap

BRD3 1 dataset

ChIP U-87MG_GBM_dBET6_1d GSE99171.BRD3.U-87MG_GBM_dBET6_1d 189 bp overlap

CBFA2T2 1 dataset

ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 250 bp overlap

CBFA2T3 2 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 317 bp overlap

ChIP K562 ENCFF673OEZ 149 bp overlap

CEBPD 1 dataset

ChIP K-562 ENCSR000BVY.CEBPD.K-562 141 bp overlap

DUX4 1 dataset

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 333 bp overlap

ERG 1 dataset

ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 139 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 494 bp overlap

ChIP DE DE-FOXA2-2 494 bp overlap

FOXD2 1 dataset

Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap

FOXH1 2 datasets

Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap

GATA1 2 datasets

Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap

ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap

GATA2 2 datasets

ChIP K562 ENCFF544PCK 251 bp overlap

ChIP WA09 GSE105081.GATA2.WA09 150 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 494 bp overlap

ChIP DE DE-GATA4-2 494 bp overlap

ChIP foregut GSE117136.GATA4.foregut 404 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 494 bp overlap

ChIP DE DE-GATA6-2 494 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 354 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 411 bp overlap

ChIP foregut GSE117136.GATA6.foregut 419 bp overlap

GFI1B 1 dataset

ChIP K-562 ENCSR509GDT.GFI1B.K-562 138 bp overlap

HAND2 1 dataset

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

HEXIM1-CDK9 1 dataset

ChIP A-375 GSE68047.HEXIM1-CDK9.A-375 145 bp overlap

IKZF2 2 datasets

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap

KLF16 1 dataset

ChIP K-562 ENCSR760UVO.KLF16.K-562 138 bp overlap

MED1 1 dataset

ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 210 bp overlap

MGA::EVX1 1 dataset

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

Mecom 1 dataset

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NEUROD1 1 dataset

Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap

NRIP1 1 dataset

ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 177 bp overlap

Neurod2 1 dataset

Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap

PHOX2A 1 dataset

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

PML 1 dataset

ChIP K-562 ENCSR000BQY.PML.K-562 140 bp overlap

PROP1 1 dataset

Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap

Prdm15 1 dataset

Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap

RREB1 1 dataset

Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap

SIX2 1 dataset

Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 229 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 494 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 276 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 337 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 224 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 271 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 366 bp overlap

STAT5A 1 dataset

ChIP K-562 ENCSR000BRR.STAT5A.K-562 128 bp overlap

TAL1 7 datasets

ChIP K-562 ENCSR106FRG.TAL1.K-562 240 bp overlap

ChIP K-562 ENCSR000EHB.TAL1.K-562 275 bp overlap

ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 141 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 146 bp overlap

ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 239 bp overlap

ChIP K562 ENCFF661CCK 277 bp overlap

ChIP ProEs GSE59087.TAL1.ProEs 185 bp overlap

TCF12 1 dataset

ChIP K-562 ENCSR744WOO.TCF12.K-562 267 bp overlap

TEAD4 1 dataset

ChIP K562 ENCFF673NIK 139 bp overlap

TFAP2A 3 datasets

Motif DE_60h DE_60h-TFAP2A_MA0872.1 13 bp overlap

Motif DE_72h DE_72h-TFAP2A_MA0872.1 13 bp overlap

ChIP WA09 GSE105081.TFAP2A.WA09 173 bp overlap

TFAP2B 2 datasets

Motif DE_60h DE_60h-TFAP2B_MA0813.1 13 bp overlap

Motif DE_72h DE_72h-TFAP2B_MA0813.1 13 bp overlap

TFAP2C 3 datasets

Motif DE_60h DE_60h-TFAP2C_MA0815.1 13 bp overlap

Motif DE_72h DE_72h-TFAP2C_MA0815.1 13 bp overlap

ChIP WA09 GSE105081.TFAP2C.WA09 143 bp overlap

TWIST1 1 dataset

Motif DE_60h DE_60h-TWIST1_MA1123.3 8 bp overlap

ZBTB26 2 datasets

Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap

Motif DE_72h DE_72h-ZBTB26_MA1579.2 8 bp overlap

ZFP42 2 datasets

Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap

Motif DE_72h DE_72h-ZFP42_MA1651.2 13 bp overlap

ZNF85 1 dataset

Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap