chr7 : 99,431,903 99,432,400
497 bp 30 TFs 1 linked gene
This 497 bp open chromatin element is linked to CPSF4 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CPSF4 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:99,426,903 – 99,437,400
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 152 bp overlap
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 372 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 174 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 169 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 103 bp overlap
FOXA1 8 datasets
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 120 bp overlap
ChIP HepG2 ENCFF207NVJ 105 bp overlap
ChIP HepG2 ENCFF361KNY 170 bp overlap
ChIP HepG2 ENCFF740VZW 93 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 89 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 56 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 221 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 122 bp overlap
FOXA2 6 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 168 bp overlap
ChIP DE DE-FOXA2-1 497 bp overlap
ChIP DE DE-FOXA2-2 497 bp overlap
ChIP HepG2 ENCFF533COJ 99 bp overlap
ChIP HepG2 ENCFF570ABM 106 bp overlap
ChIP HepG2 ENCFF894AYY 143 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 192 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 497 bp overlap
ChIP DE DE-GATA4-2 497 bp overlap
ChIP foregut GSE117136.GATA4.foregut 305 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 314 bp overlap
GATA6 7 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 170 bp overlap
ChIP DE DE-GATA6-1 497 bp overlap
ChIP DE DE-GATA6-2 497 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 262 bp overlap
ChIP foregut GSE117136.GATA6.foregut 344 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 268 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 264 bp overlap
HNF1A 1 dataset
ChIP HepG2 ENCFF540TRC 294 bp overlap
HNF4A 2 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 125 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 89 bp overlap
HOXA3 2 datasets
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 86 bp overlap
ChIP HepG2 ENCFF374TCI 67 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 144 bp overlap
MYC 1 dataset
ChIP GEN2-2 GSE70275.MYC.GEN2-2 110 bp overlap
NR3C1 1 dataset
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 233 bp overlap
PAXIP1 1 dataset
ChIP HepG2 ENCFF526NOJ 295 bp overlap
PITX1 1 dataset
ChIP HepG2 ENCFF468QTQ 109 bp overlap
POLR2A 2 datasets
ChIP prostate gland ENCFF881OMH 168 bp overlap
ChIP vagina ENCFF305NWS 293 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 93 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 277 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 456 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 260 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 121 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 451 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 229 bp overlap
TFAP2A 2 datasets
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 131 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 121 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 126 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 185 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 117 bp overlap
YY1 1 dataset
ChIP HepG2 ENCFF956MUY 104 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 374 bp overlap