chr7 : 39,088,851 39,089,008
157 bp 24 TFs 1 linked gene
This 157 bp open chromatin element is linked to POU6F2 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
POU6F2 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:39,083,851 – 39,094,008
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 104 bp overlap
BRD4 1 dataset
ChIP HAP1 GSE108387.BRD4.HAP1 118 bp overlap
CTCF 42 datasets
ChIP Caco-2 ENCFF934QYS 129 bp overlap
ChIP GM23338 ENCFF772DML 157 bp overlap
ChIP H1 ENCFF764RHO 157 bp overlap
ChIP H9 ENCFF152GTF 157 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 157 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 157 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 157 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 157 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 157 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 157 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 157 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 157 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 157 bp overlap
ChIP HEK293 ENCFF498RMM 154 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 110 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 105 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 157 bp overlap
ChIP MCF-7 ENCFF139NQI 157 bp overlap
ChIP MCF-7 ENCFF162GNE 157 bp overlap
ChIP MCF-7 ENCFF198DQX 157 bp overlap
ChIP MCF-7 ENCFF494VXA 157 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 157 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 157 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 132 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 136 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 122 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 143 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 157 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 157 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 113 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 157 bp overlap
ChIP endodermal cell ENCFF471YCZ 157 bp overlap
ChIP endodermal cell ENCFF471YCZ 132 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 156 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 157 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 151 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 118 bp overlap
ChIP nerve_tibial ENCSR469POZ.CTCF.nerve_tibial 157 bp overlap
ChIP neural progenitor cell ENCFF581WPG 157 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 157 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 157 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 146 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 157 bp overlap
FOXA1 1 dataset
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 149 bp overlap
FOXF1 1 dataset
ChIP GIST48 GSE106624.FOXF1.GIST48 157 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 157 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 133 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 101 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 130 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 157 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 157 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 120 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 106 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 157 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 157 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 98 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 136 bp overlap
STAG1 1 dataset
ChIP MCF-7 ERP000209.STAG1.MCF-7 93 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 157 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 157 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 155 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 157 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 120 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 157 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 157 bp overlap