Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

42 transcription factors

BHLHE22 2 datasets

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap

BRD2 2 datasets

ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 214 bp overlap

ChIP SUM159PT_DMSO GSE131097.BRD2.SUM159PT_DMSO 54 bp overlap

BRD4 3 datasets

ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 271 bp overlap

ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 246 bp overlap

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 271 bp overlap

CEBPA 2 datasets

Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap

Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap

CEBPD 2 datasets

Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap

Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap

CTCF 1 dataset

ChIP parathyroid adenoma ENCFF173CEN 173 bp overlap

Cebpa 4 datasets

ChIP BLaER1 ENCFF093OYK 97 bp overlap

ChIP BLaER1 ENCFF346MCV 117 bp overlap

ChIP BLaER1 ENCFF798NMV 125 bp overlap

ChIP BLaER1 ENCFF896HSY 111 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 246 bp overlap

FOXA1 1 dataset

ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 104 bp overlap

FOXD3 2 datasets

Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap

Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap

Foxq1 2 datasets

Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap

Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap

GATA4 2 datasets

Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 234 bp overlap

GLIS2 1 dataset

Motif ES_0h ES_0h-GLIS2_MA0736.1 14 bp overlap

INO80 1 dataset

ChIP Huh-7 GSE97411.INO80.Huh-7 271 bp overlap

IRF7 2 datasets

Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap

Motif ES_0h ES_0h-IRF7_MA0772.2 13 bp overlap

IRF8 2 datasets

Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap

Motif ES_0h ES_0h-IRF8_MA0652.2 13 bp overlap

KMT2A 2 datasets

ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 243 bp overlap

ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 220 bp overlap

KMT2B 1 dataset

ChIP HEK293T_C-term_C49 GSE90762.KMT2B.HEK293T_C-term_C49 87 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap

Olig2 2 datasets

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap

RARA 1 dataset

Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap

RARA::RXRA 1 dataset

Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap

RARA::RXRG 1 dataset

Motif ES_0h ES_0h-RARARXRG_MA1149.2 17 bp overlap

RBPJ 2 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

RELA 3 datasets

ChIP LNCaP_DHT_TNFA GSE83860.RELA.LNCaP_DHT_TNFA 103 bp overlap

ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 82 bp overlap

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 129 bp overlap

SMARCA4 2 datasets

ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 97 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 188 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 140 bp overlap

SMARCC1 2 datasets

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 242 bp overlap

ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 58 bp overlap

SS18 1 dataset

ChIP Aska-SS GSE108025.SS18.Aska-SS 271 bp overlap

STAT1::STAT2 2 datasets

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap

TFAP4 2 datasets

Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap

Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap

TRIM28 2 datasets

ChIP HEK293 ENCFF265CEM 271 bp overlap

ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 187 bp overlap

Tcf12 2 datasets

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap

Twist2 2 datasets

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap

VEZF1 1 dataset

Motif ES_0h ES_0h-VEZF1_MA1578.2 6 bp overlap

YY1 1 dataset

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 109 bp overlap

YY1AP1 1 dataset

ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 137 bp overlap

ZNF281 1 dataset

Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap

ZNF354C 2 datasets

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap

ZNF547 1 dataset

Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap

ZNF558 2 datasets

Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap

Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap

ZNF766 2 datasets

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap

Genome Browser