Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

51 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 196 bp overlap

BARX1 1 dataset

Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 157 bp overlap

BSX 1 dataset

Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 131 bp overlap

CTCF 1 dataset

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 196 bp overlap

DLX1 1 dataset

Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 171 bp overlap

EP300 3 datasets

ChIP H1 ENCFF927IYK 196 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 142 bp overlap

ChIP hESC GSE17917.EP300.hESC 196 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF018MKA 196 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 196 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 196 bp overlap

ChIP DE DE-FOXA2-2 196 bp overlap

FOXH1 1 dataset

Motif ES_0h ES_0h-FOXH1_MA0479.2 8 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 196 bp overlap

ChIP DE DE-GATA4-2 196 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-1 196 bp overlap

ChIP DE DE-GATA6-2 196 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 196 bp overlap

GBX2 1 dataset

Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap

KLF4 1 dataset

ChIP HAP1 GSE130417.KLF4.HAP1 135 bp overlap

LBX2 1 dataset

Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 180 bp overlap

MSX1 1 dataset

Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap

NANOG 11 datasets

ChIP GM23338 ENCFF065NZG 196 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 196 bp overlap

ChIP H1 ENCFF747ZPQ 196 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 196 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 196 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 176 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 196 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 196 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 196 bp overlap

ChIP hESC GSE18292.NANOG.hESC 187 bp overlap

ChIP hESC GSE20650.NANOG.hESC 171 bp overlap

Nobox 1 dataset

Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap

ONECUT1 1 dataset

Motif ES_0h ES_0h-ONECUT1_MA0679.3 9 bp overlap

PAX3 1 dataset

Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap

POU5F1 9 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 196 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 196 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 196 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 196 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 108 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 196 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 196 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 196 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 180 bp overlap

Pax7 1 dataset

Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap

RAD21 2 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 196 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 158 bp overlap

RAX 1 dataset

Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 196 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 196 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 196 bp overlap

SMARCA4 4 datasets

ChIP WA09 GSE105028.SMARCA4.WA09 196 bp overlap

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 196 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 179 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 196 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 159 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 195 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 170 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 196 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 196 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 196 bp overlap

SOX2 4 datasets

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 164 bp overlap

ChIP hESC GSE69479.SOX2.hESC 192 bp overlap

ChIP hESC GSE18292.SOX2.hESC 135 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 196 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 143 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 168 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 196 bp overlap

TEAD4 2 datasets

ChIP ESC S26-ESC-d0-TEAD4-exp1 124 bp overlap

ChIP H1 ENCFF778PAX 190 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 196 bp overlap

ZBTB17 1 dataset

Motif ES_0h ES_0h-ZBTB17_MA2102.1 8 bp overlap

ZNF85 1 dataset

Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap

Genome Browser