chr6 : 66,379,179 – 66,380,254

1,075 bp 63 TFs 0 linked genes

This 1.1 kb open chromatin element has no linked target genes and is bound by 63 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

63 transcription factors

BARX1 1 dataset

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BARX2 1 dataset

Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap

BSX 1 dataset

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

Bach1::Mafk 3 datasets

Motif DE_48h DE_48h-Bach1Mafk_MA0591.2 12 bp overlap

Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap

Motif DE_72h DE_72h-Bach1Mafk_MA0591.2 12 bp overlap

DLX1 1 dataset

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

DPRX 1 dataset

Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap

Dlx3 1 dataset

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 304 bp overlap

ETV2::HOXB13 2 datasets

Motif DE_60h DE_60h-ETV2HOXB13_MA1943.2 13 bp overlap

Motif DE_72h DE_72h-ETV2HOXB13_MA1943.2 13 bp overlap

ETV5::FOXO1 2 datasets

Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap

Motif DE_72h DE_72h-ETV5FOXO1_MA1947.2 10 bp overlap

Elf5 1 dataset

Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 990 bp overlap

ChIP DE DE-FOXA2-2 572 bp overlap

FOXD3 1 dataset

Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap

FOXE1 1 dataset

Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap

FOXG1 1 dataset

Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap

FOXN3 1 dataset

Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap

FOXO1::ELF1 2 datasets

Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap

Motif DE_72h DE_72h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::FLI1 2 datasets

Motif DE_60h DE_60h-FOXO1FLI1_MA1956.2 13 bp overlap

Motif DE_72h DE_72h-FOXO1FLI1_MA1956.2 13 bp overlap

GATA1::TAL1 2 datasets

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 873 bp overlap

ChIP DE DE-GATA4-2 777 bp overlap

ChIP DE DE-GATA4-2 152 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 200 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 592 bp overlap

ChIP DE DE-GATA6-2 993 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 460 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 331 bp overlap

GBX2 1 dataset

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

IKZF2 1 dataset

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

LBX2 1 dataset

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

Lhx3 2 datasets

Motif DE_48h DE_48h-Lhx3_MA0135.2 12 bp overlap

Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap

MAX::MYC 2 datasets

Motif DE_60h DE_60h-MAXMYC_MA0059.2 10 bp overlap

Motif DE_72h DE_72h-MAXMYC_MA0059.2 10 bp overlap

MGA::EVX1 1 dataset

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

MSX1 1 dataset

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

MXI1 2 datasets

Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap

Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap

Mafg 3 datasets

Motif DE_48h DE_48h-Mafg_MA0659.4 12 bp overlap

Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap

Motif DE_72h DE_72h-Mafg_MA0659.4 12 bp overlap

Msx3 1 dataset

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NEUROD1 1 dataset

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 185 bp overlap

Nfat5 2 datasets

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap

Nfatc2 2 datasets

Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap

Motif DE_72h DE_72h-Nfatc2_MA0152.3 8 bp overlap

Nobox 1 dataset

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

Nr2e1 3 datasets

Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap

Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap

Motif DE_72h DE_72h-Nr2e1_MA0676.1 9 bp overlap

Nr2e3 1 dataset

Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap

PHOX2B 3 datasets

Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap

Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap

Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap

Pax7 3 datasets

Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap

Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap

RAX 1 dataset

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

RBPJ 1 dataset

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

Rhox11 3 datasets

Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap

Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap

Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 263 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 262 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 411 bp overlap

SOX18 1 dataset

Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap

SRY 1 dataset

Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap

Stat4 3 datasets

Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap

Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap

Motif DE_72h DE_72h-Stat4_MA0518.2 10 bp overlap

TEF 2 datasets

Motif DE_48h DE_48h-TEF_MA0843.2 10 bp overlap

Motif DE_60h DE_60h-TEF_MA0843.2 10 bp overlap

THRB 2 datasets

Motif DE_60h DE_60h-THRB_MA1576.2 18 bp overlap

Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap

ZIM3 3 datasets

Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap

Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap

Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap

ZNF136 1 dataset

Motif DE_60h DE_60h-ZNF136_MA1588.1 15 bp overlap

ZNF24 2 datasets

Motif DE_48h DE_48h-ZNF24_MA1124.1 13 bp overlap

Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap

ZNF257 3 datasets

Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap

Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap

Motif DE_72h DE_72h-ZNF257_MA1710.2 10 bp overlap

ZNF317 6 datasets

Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap

Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap

Motif DE_72h DE_72h-ZNF317_MA1593.2 8 bp overlap

ZNF652 1 dataset

ChIP HepG2 ENCFF331VPZ 381 bp overlap