chr6 : 51,675,140 51,675,315
175 bp 27 TFs 0 linked genes
This 175 bp open chromatin element has no linked target genes and is bound by 27 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:51,670,140 – 51,680,315
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
BRD4 6 datasets
ChIP BE2C GSE80151.BRD4.BE2C 175 bp overlap
ChIP CLB-Ga GSE133453.BRD4.CLB-Ga 175 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 175 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 175 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 175 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 174 bp overlap
CDK9 2 datasets
ChIP Kelly_CYC065 GSE107126.CDK9.Kelly_CYC065 175 bp overlap
ChIP Kelly_DMSO GSE107126.CDK9.Kelly_DMSO 175 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 175 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 122 bp overlap
CTCF 2 datasets
ChIP BE2C ENCFF757SRF 175 bp overlap
ChIP endodermal cell ENCFF471YCZ 175 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 163 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 175 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 96 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 175 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 155 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 175 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 175 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 175 bp overlap
MLX 1 dataset
ChIP HepG2 ENCFF652PXN 60 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 106 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 56 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 124 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 175 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 175 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 175 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 175 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 92 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 175 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 175 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 175 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 175 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 175 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 175 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 175 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 175 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 161 bp overlap
SMARCA4 2 datasets
ChIP NGP GSE134626.SMARCA4.NGP 142 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 175 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 175 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 165 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 175 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 175 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 175 bp overlap