chr6 : 50,270,391 50,270,710
319 bp 26 TFs 0 linked genes
This 319 bp open chromatin element has no linked target genes and is bound by 26 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:50,265,391 – 50,275,710
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
ATF2 5 datasets
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 232 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 181 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 285 bp overlap
ChIP HepG2 ENCFF955VER 232 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 233 bp overlap
ATF7 2 datasets
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 269 bp overlap
ChIP HepG2 ENCFF470FKK 299 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 319 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 319 bp overlap
BRD4 5 datasets
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 307 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 319 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 319 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 319 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 168 bp overlap
CREB1 1 dataset
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 218 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 269 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 91 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 79 bp overlap
FOXA1 3 datasets
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 265 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 170 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 192 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 285 bp overlap
ChIP DE DE-FOXA2-2 319 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 99 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCFF485YIB 195 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 154 bp overlap
GATA3 2 datasets
ChIP SH-SY5Y ENCFF475HYF 88 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 149 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 305 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 266 bp overlap
HOXD13 1 dataset
ChIP HEK293 ENCFF590OUV 254 bp overlap
HSF1 2 datasets
ChIP U2OS_HEAT GSE60984.HSF1.U2OS_HEAT 87 bp overlap
ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 65 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 307 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 206 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 308 bp overlap
JUND 1 dataset
ChIP HepG2 ENCFF869OPW 241 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 319 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 319 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 299 bp overlap
TEAD1 1 dataset
ChIP MSTO GSE68170.TEAD1.MSTO 200 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 231 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 319 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 160 bp overlap