chr6 : 27,047,461 27,047,994
533 bp 28 TFs 5 linked genes
This 533 bp open chromatin element is linked to 5 target genes and is bound by 28 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
LINC00240 27.5 kb Distal Multiome
LARRPM 27.5 kb Distal Multiome
GUSBP2 91.3 kb Distal Multiome
H2AC12 99.3 kb Distal Multiome
ENSG00000290009 130.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:27,042,461 – 27,052,994
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 248 bp overlap
ATF7 1 dataset
ChIP HepG2 ENCFF470FKK 92 bp overlap
CAVIN1 1 dataset
ChIP K562 ENCFF731YBD 277 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 347 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 85 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 301 bp overlap
DDX20 1 dataset
ChIP K562 ENCFF373BEC 228 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 221 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 533 bp overlap
ChIP DE DE-FOXA2-2 451 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 454 bp overlap
ChIP DE DE-GATA4-2 461 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 421 bp overlap
ChIP DE DE-GATA6-2 446 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 417 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 385 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 460 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 470 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 178 bp overlap
IKZF1 2 datasets
ChIP K562 ENCFF348IBL 127 bp overlap
ChIP K562 ENCFF771OHZ 162 bp overlap
IRF9 1 dataset
ChIP K562 ENCFF346PQL 223 bp overlap
KLF6 1 dataset
ChIP K562 ENCFF948QSP 148 bp overlap
NR4A1 1 dataset
ChIP K562 ENCFF998LHF 268 bp overlap
PTTG1 1 dataset
ChIP K562 ENCFF017KRM 210 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 242 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 342 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 418 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 426 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 460 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 533 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 287 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 323 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 390 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 54 bp overlap
TEAD1 2 datasets
ChIP K562 ENCFF465AQA 170 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 80 bp overlap
ZNF215 1 dataset
ChIP K562 ENCFF317MOH 234 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 150 bp overlap
ZNF311 1 dataset
ChIP K562 ENCFF986QSP 195 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 219 bp overlap
ZNF668 1 dataset
ChIP K562 ENCFF112IUE 194 bp overlap