chr5 : 176,938,324 176,938,817
493 bp 37 TFs 5 linked genes
This 493 bp open chromatin element is linked to 5 target genes and is bound by 37 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
UIMC1 68.1 kb Distal Multiome
ZNF346 84.0 kb Distal Multiome
FGFR4 148.2 kb Distal Multiome
NSD1 193.1 kb Distal Multiome
TSPAN17 291.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:176,933,324 – 176,943,817
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
BCL6B 1 dataset
Motif DE_72h DE_72h-BCL6B_MA0731.1 17 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 291 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 193 bp overlap
FEZF2 1 dataset
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 473 bp overlap
ChIP DE DE-FOXA2-2 476 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 203 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 205 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA2 1 dataset
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 490 bp overlap
ChIP DE DE-GATA4-2 493 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 436 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 412 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 287 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 195 bp overlap
ChIP DE DE-GATA6-1 410 bp overlap
ChIP DE DE-GATA6-2 477 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 397 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 381 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 389 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 493 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 447 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 410 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 449 bp overlap
ChIP foregut GSE117136.GATA6.foregut 404 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 368 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 400 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 379 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 305 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Hand1 1 dataset
Motif DE_72h DE_72h-Hand1_MA2123.1 9 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 329 bp overlap
MAZ 1 dataset
Motif DE_72h DE_72h-MAZ_MA1522.2 8 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 59 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 229 bp overlap
PPARG 1 dataset
Motif DE_72h DE_72h-PPARG_MA0066.2 19 bp overlap
PRDM1 1 dataset
Motif DE_72h DE_72h-PRDM1_MA0508.4 7 bp overlap
SMAD2 1 dataset
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 335 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 375 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 420 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 439 bp overlap
Stat5b 1 dataset
Motif DE_72h DE_72h-Stat5b_MA1625.2 9 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 194 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Tfcp2l1 1 dataset
Motif DE_72h DE_72h-Tfcp2l1_MA0145.2 14 bp overlap
ZNF184 1 dataset
Motif DE_72h DE_72h-ZNF184_MA2120.1 13 bp overlap
ZNF530 1 dataset
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF682 1 dataset
Motif DE_72h DE_72h-ZNF682_MA1599.2 11 bp overlap
ZNF766 1 dataset
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
Zfp809 1 dataset
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap