chr1 : 95,518,344 95,518,903
559 bp 28 TFs 1 linked gene
This 559 bp open chromatin element is linked to LINC02607 and is bound by 28 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02607 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:95,513,344 – 95,523,903
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 244 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 494 bp overlap
ChIP H1 ENCFF126NLU 462 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 160 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 205 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 339 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 331 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 361 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 176 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 348 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 320 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 178 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 462 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 559 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 559 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 301 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 559 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 559 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 559 bp overlap
ChIP hESC GSE20650.NANOG.hESC 360 bp overlap
ChIP hESC GSE18292.NANOG.hESC 359 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 269 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 263 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU5F1 13 datasets
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 559 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 483 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 559 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 222 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 214 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 349 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 318 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 210 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 438 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 287 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 434 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 161 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 213 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 152 bp overlap
SMARCA4 3 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 301 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 402 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 559 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 325 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 559 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 440 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 559 bp overlap
SOX2 3 datasets
ChIP hESC GSE69479.SOX2.hESC 228 bp overlap
ChIP hESC GSE18292.SOX2.hESC 106 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 559 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 259 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 196 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 112 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 296 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 319 bp overlap