chr5 : 97,140,357 97,140,559
202 bp 38 TFs 1 linked gene
This 202 bp open chromatin element is linked to LIX1 and is bound by 38 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LIX1 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:97,135,357 – 97,145,559
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 124 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 154 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 131 bp overlap
BRD4 1 dataset
ChIP COLO-320 GSE73319.BRD4.COLO-320 202 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 202 bp overlap
CTCF 2 datasets
ChIP C4-2B ENCFF821XVN 202 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 148 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 202 bp overlap
ChIP HEK293 ENCFF528YED 135 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 162 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 202 bp overlap
GRHL2 4 datasets
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
ChIP LNCaP GSE80256.GRHL2.LNCaP 153 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 125 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 202 bp overlap
HOXB13 3 datasets
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 147 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 140 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 151 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Nkx2-1 1 dataset
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 169 bp overlap
PKNOX1 3 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
ChIP MCF-7 ENCFF116OCS 202 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 202 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 202 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAD21 1 dataset
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 112 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 114 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 202 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF324 1 dataset
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap