chr5 : 23,805,005 – 23,805,872
867 bp 51 TFs 0 linked genes
This 867 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:23,800,005 – 23,810,872
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
EBF1 2 datasets
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap
EBF3 2 datasets
Motif DE_36h DE_36h-EBF3_MA1637.2 9 bp overlap
Motif DE_48h DE_48h-EBF3_MA1637.2 9 bp overlap
EOMES 4 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
Ebf2 2 datasets
Motif DE_36h DE_36h-Ebf2_MA1604.2 9 bp overlap
Motif DE_48h DE_48h-Ebf2_MA1604.2 9 bp overlap
Ebf4 2 datasets
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 804 bp overlap
ChIP DE DE-FOXA2-2 793 bp overlap
FOXC1 2 datasets
Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXH1 2 datasets
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 627 bp overlap
ChIP DE DE-GATA4-2 695 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 685 bp overlap
ChIP DE DE-GATA6-2 689 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 378 bp overlap
MAZ 2 datasets
Motif DE_36h DE_36h-MAZ_MA1522.2 8 bp overlap
Motif DE_48h DE_48h-MAZ_MA1522.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_36h DE_36h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap
Nkx2-1 1 dataset
Motif DE_36h DE_36h-Nkx2-1_MA1994.2 7 bp overlap
RFX4 2 datasets
Motif DE_36h DE_36h-RFX4_MA0799.3 13 bp overlap
Motif DE_48h DE_48h-RFX4_MA0799.3 13 bp overlap
RREB1 1 dataset
Motif DE_36h DE_36h-RREB1_MA0073.2 19 bp overlap
RUNX3 1 dataset
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
SOX10 3 datasets
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 548 bp overlap
SOX4 3 datasets
Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap
Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap
Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap
Sox6 3 datasets
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
TBR1 3 datasets
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
TBX18 3 datasets
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX19 3 datasets
Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap
Motif DE_48h DE_48h-TBX19_MA0804.2 17 bp overlap
Motif DE_60h DE_60h-TBX19_MA0804.2 17 bp overlap
TBX2 3 datasets
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX20 3 datasets
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TBX21 3 datasets
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX3 3 datasets
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TBXT 3 datasets
Motif DE_36h DE_36h-TBXT_MA0009.2 16 bp overlap
Motif DE_48h DE_48h-TBXT_MA0009.2 16 bp overlap
Motif DE_60h DE_60h-TBXT_MA0009.2 16 bp overlap
TFAP2A 2 datasets
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_48h DE_48h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 2 datasets
Motif DE_36h DE_36h-TFAP2B_MA0812.2 9 bp overlap
Motif DE_48h DE_48h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 2 datasets
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 4 datasets
Motif DE_36h DE_36h-TFAP2E_MA1569.2 9 bp overlap
Motif DE_36h DE_36h-TFAP2E_MA1569.2 9 bp overlap
Motif DE_48h DE_48h-TFAP2E_MA1569.2 9 bp overlap
Motif DE_48h DE_48h-TFAP2E_MA1569.2 9 bp overlap
Tbx6 3 datasets
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 170 bp overlap
ZBTB24 1 dataset
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap
ZKSCAN5 1 dataset
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF189 2 datasets
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
ZNF213 2 datasets
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
ZNF214 1 dataset
Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap
ZNF257 1 dataset
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
ZNF320 1 dataset
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
ZNF341 2 datasets
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
ZNF418 1 dataset
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
ZNF528 1 dataset
Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap
ZNF549 2 datasets
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
Motif DE_48h DE_48h-ZNF549_MA1728.2 8 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
ZNF708 2 datasets
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
Motif DE_48h DE_48h-ZNF708_MA1730.2 9 bp overlap
ZNF766 3 datasets
Motif DE_36h DE_36h-ZNF766_MA2098.1 9 bp overlap
Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap
Zfp335 3 datasets
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
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