chr1 : 87,089,874 87,090,837
963 bp 29 TFs 0 linked genes
This 963 bp open chromatin element has no linked target genes and is bound by 29 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:87,084,874 – 87,095,837
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 163 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 254 bp overlap
CTCF 1 dataset
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 264 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 338 bp overlap
ChIP DE DE-GATA4-2 963 bp overlap
ChIP foregut GSE117136.GATA4.foregut 230 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 263 bp overlap
ChIP DE DE-GATA6-2 963 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 419 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 51 bp overlap
JUN 1 dataset
ChIP DE_D2 S54-DE-d2-JUN-exp2 297 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 198 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 227 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 178 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 117 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 308 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 270 bp overlap
RBM22 1 dataset
ChIP HepG2 ENCFF561IAJ 465 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 227 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 313 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 288 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 87 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 166 bp overlap
Stat5b 1 dataset
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
Stat6 1 dataset
Motif DE_60h DE_60h-Stat6_MA0520.2 10 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 204 bp overlap
ZNF274 1 dataset
Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 325 bp overlap
ChIP K562 ENCFF281INV 457 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 249 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 163 bp overlap
ZNF485 1 dataset
ChIP HEK293T GSE78099.ZNF485.HEK293T 263 bp overlap