chr1 : 84,882,868 84,883,419
551 bp 18 TFs 1 linked gene
This 551 bp open chromatin element is linked to LPAR3 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LPAR3 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:84,877,868 – 84,888,419
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 128 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 185 bp overlap
BRD2 1 dataset
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 187 bp overlap
BRD4 4 datasets
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 193 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 452 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 270 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 269 bp overlap
CREBBP 3 datasets
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 215 bp overlap
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 162 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 128 bp overlap
FOXL2 2 datasets
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 76 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 52 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 147 bp overlap
GATA2 10 datasets
ChIP ESF GSE108408.GATA2.ESF 182 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 295 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 295 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 288 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 214 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 216 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 152 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 255 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 199 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 346 bp overlap
GATA3 6 datasets
ChIP Jurkat GSE120063.GATA3.Jurkat 187 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 198 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 160 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 290 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 245 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 265 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 456 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 277 bp overlap
GATA4 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 310 bp overlap
ChIP DE DE-GATA4-1 358 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 347 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 283 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 359 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 267 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 56 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 69 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 99 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 172 bp overlap
MED1 2 datasets
ChIP hMSC-TERT4_D0 GSE104537.MED1.hMSC-TERT4_D0 103 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 108 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 219 bp overlap
SPI1 2 datasets
ChIP OCI-Ly3 GSE56857.SPI1.OCI-Ly3 90 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 113 bp overlap
TEAD4 1 dataset
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 314 bp overlap
YY1AP1 5 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 76 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 147 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 209 bp overlap
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 168 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 146 bp overlap