chr1 : 8,855,525 8,856,275
750 bp 37 TFs 3 linked genes
This 750 bp open chromatin element is linked to ENO1, RERE, and GPR157 and is bound by 37 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
ENO1 22.9 kb Distal Multiome
RERE 38.2 kb Distal Multiome
GPR157 272.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:8,850,525 – 8,861,275
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 359 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 84 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 246 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 251 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 107 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 485 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 197 bp overlap
FOSB 1 dataset
ChIP A549 ENCFF029EEU 341 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 510 bp overlap
ChIP DE DE-FOXA2-2 469 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 523 bp overlap
ChIP DE DE-GATA4-2 661 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 294 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 477 bp overlap
ChIP DE DE-GATA6-2 653 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 482 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 349 bp overlap
HNRNPK 1 dataset
ChIP primary-keratinocyte GSE122327.HNRNPK.primary-keratinocyte 104 bp overlap
HOXA7 1 dataset
ChIP A549 ENCFF746ZBJ 331 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 156 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 191 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 330 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 237 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 391 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 298 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 330 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 143 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCFF273VKX 289 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 313 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 341 bp overlap
POLR2A 1 dataset
ChIP PFSK-1 ENCFF576NIT 473 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 155 bp overlap
ChIP HepG2 ENCFF508UTS 199 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 474 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF554DMZ 435 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 331 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 214 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 416 bp overlap
SUPT5H 7 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 248 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 332 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 121 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 160 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 130 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 185 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 123 bp overlap
TAF15 2 datasets
ChIP HepG2 ENCFF406BOT 481 bp overlap
ChIP HepG2 ENCFF406BOT 368 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 452 bp overlap
ZBTB40 1 dataset
ChIP K562 ENCFF521DSV 101 bp overlap
ZNF230 1 dataset
ChIP HepG2 ENCFF370ATB 108 bp overlap
ZNF483 1 dataset
ChIP HepG2 ENCFF464ZKH 128 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 178 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 131 bp overlap