chr4 : 7,187,074 7,187,464
390 bp 31 TFs 1 linked gene
This 390 bp open chromatin element is linked to SORCS2 and is bound by 31 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SORCS2 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:7,182,074 – 7,192,464
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
BATF3 1 dataset
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 315 bp overlap
CTCF 82 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 234 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 264 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 186 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 130 bp overlap
ChIP BE2C ENCFF757SRF 197 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 118 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 130 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 132 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 158 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 174 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 218 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 202 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 118 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 145 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 82 bp overlap
ChIP HepG2 ENCFF348BUL 176 bp overlap
ChIP HepG2 ENCFF757EKU 258 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 180 bp overlap
ChIP IMR-90 ENCFF887MRH 174 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 168 bp overlap
ChIP IMR-90 GSE43070.CTCF.IMR-90 100 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 213 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 171 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 152 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 144 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 125 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 324 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 255 bp overlap
ChIP K562 ENCFF082GOI 155 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 182 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 151 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 127 bp overlap
ChIP MCF-7 ENCFF414SZG 158 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 175 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 166 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 171 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 170 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 101 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 161 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 179 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 189 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 161 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 159 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 216 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 252 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 110 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 120 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 151 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 177 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 165 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 218 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 177 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 152 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 111 bp overlap
ChIP brain ENCFF685VRG 300 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 197 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 228 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 249 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 190 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 150 bp overlap
ChIP chondrocyte ENCFF134ORZ 179 bp overlap
ChIP chondrocyte ENCFF134ORZ 130 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 202 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 196 bp overlap
ChIP endodermal cell ENCFF471YCZ 75 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 137 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 147 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 122 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 150 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 152 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 245 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 194 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 188 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 205 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 187 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 107 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 166 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 274 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 176 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 108 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 180 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 276 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 227 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 229 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 202 bp overlap
EZH2 3 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 323 bp overlap
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 64 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 348 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 326 bp overlap
ChIP DE DE-FOXA2-2 390 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 327 bp overlap
ChIP DE DE-GATA4-2 390 bp overlap
ChIP foregut GSE117136.GATA4.foregut 245 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 365 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 374 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 339 bp overlap
ChIP DE DE-GATA6-2 390 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 373 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 351 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 358 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 360 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 388 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 390 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 343 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 378 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 158 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 114 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 333 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 175 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 148 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 261 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 197 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 390 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 264 bp overlap
RAD21 15 datasets
ChIP H1 ENCFF698EWO 194 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 333 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 219 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 131 bp overlap
ChIP HepG2 ENCFF360ZSW 152 bp overlap
ChIP HepG2 ENCFF906QIS 177 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 149 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 152 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 209 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 154 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 170 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 293 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 129 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 135 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 198 bp overlap
RELB 1 dataset
ChIP L1236 GSE63736.RELB.L1236 107 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 269 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 390 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 390 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 390 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 372 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 390 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 389 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 356 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 390 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 139 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 234 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 209 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 221 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 390 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 184 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 123 bp overlap
ChIP HepG2 ENCFF843EBZ 239 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 167 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 288 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 267 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 223 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 105 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 347 bp overlap