chr3 : 192,417,677 192,417,893
216 bp 37 TFs 1 linked gene
This 216 bp open chromatin element is linked to FGF12 and is bound by 37 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FGF12 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:192,412,677 – 192,422,893
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 126 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 70 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 125 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 191 bp overlap
ESR1 9 datasets
ChIP MCF-7 GSE103023.ESR1.MCF-7 160 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 126 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 148 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 171 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 178 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 179 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 171 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 141 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 164 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 191 bp overlap
FOXA1 3 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 216 bp overlap
ChIP MCF-7_1117 GSE124667.FOXA1.MCF-7_1117 170 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 146 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 128 bp overlap
ChIP DE DE-FOXA2-1 216 bp overlap
ChIP DE DE-FOXA2-2 216 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 120 bp overlap
GATA1 3 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 136 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 165 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 121 bp overlap
GATA2 3 datasets
ChIP VCaP GSE125236.GATA2.VCaP 143 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 216 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 216 bp overlap
GATA3 16 datasets
ChIP A1A3_Brg1KD_Dex GSE112491.GATA3.A1A3_Brg1KD_Dex 216 bp overlap
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 207 bp overlap
ChIP A1A3_EtOH GSE112491.GATA3.A1A3_EtOH 167 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 180 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 209 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 161 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 180 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 156 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 147 bp overlap
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 113 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 187 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 173 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 200 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 143 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 168 bp overlap
ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 158 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 151 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 134 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 216 bp overlap
ChIP DE DE-GATA4-2 216 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 191 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 216 bp overlap
ChIP foregut GSE117136.GATA4.foregut 216 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 216 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 216 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 189 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 181 bp overlap
ChIP DE DE-GATA6-1 216 bp overlap
ChIP DE DE-GATA6-2 216 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 216 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 216 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 216 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 216 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 216 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 216 bp overlap
ChIP foregut GSE117136.GATA6.foregut 216 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 206 bp overlap
IRF2 1 dataset
Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap
IRF5 1 dataset
Motif DE_36h DE_36h-IRF5_MA1420.1 14 bp overlap
NCOA2 2 datasets
ChIP MCF-7 ERP000901.NCOA2.MCF-7 135 bp overlap
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 165 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 216 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 165 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 162 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 216 bp overlap
ChIP H1 ENCFF833NJP 216 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_PPARG_HYPO GSE50144.PPARG.HUVEC-C_PPARG_HYPO 123 bp overlap
RARA 1 dataset
Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 216 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 135 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 216 bp overlap
Spz1 1 dataset
Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 205 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 141 bp overlap
TBP 1 dataset
ChIP hESC_10h GSE122298.TBP.hESC_10h 64 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 199 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 211 bp overlap
Zic3 1 dataset
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap