chr3 : 152,151,394 152,151,791
397 bp 36 TFs 1 linked gene
This 397 bp open chromatin element is linked to LINC02917 and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02917 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:152,146,394 – 152,156,791
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
BATF 2 datasets
ChIP GM12878 ENCFF954REE 70 bp overlap
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 132 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 57 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 315 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 197 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 147 bp overlap
FOSL2 1 dataset
ChIP SK-N-SH ENCFF127ZDW 190 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCFF264DJE 266 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 195 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 184 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 260 bp overlap
HSF1 2 datasets
ChIP BPE_HEAT GSE38901.HSF1.BPE_HEAT 161 bp overlap
ChIP hTERT-HME1_HEAT GSE38901.HSF1.hTERT-HME1_HEAT 168 bp overlap
IRF4 4 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 158 bp overlap
ChIP GM12878 ENCFF769ZDL 207 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 84 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 93 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 258 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 165 bp overlap
KLF4 2 datasets
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 131 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 210 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 278 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 203 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF754JQR 304 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 397 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 397 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 360 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 260 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 265 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 193 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 278 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 199 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 171 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 340 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 240 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 196 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 279 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 321 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 154 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 149 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 371 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap