chr1 : 55,206,347 55,206,543
196 bp 30 TFs 1 linked gene
This 196 bp open chromatin element is linked to USP24 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
USP24 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:55,201,347 – 55,211,543
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 147 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 76 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 146 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 147 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 157 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 145 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 196 bp overlap
ChIP DE DE-GATA4-2 196 bp overlap
ChIP foregut GSE117136.GATA4.foregut 196 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 196 bp overlap
GATA6 11 datasets
ChIP AGS GSE51705.GATA6.AGS 107 bp overlap
ChIP DE DE-GATA6-1 196 bp overlap
ChIP DE DE-GATA6-2 196 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 196 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 196 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 196 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 196 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 196 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 196 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 196 bp overlap
ChIP foregut GSE117136.GATA6.foregut 196 bp overlap
HDAC2 1 dataset
ChIP K562 ENCFF744ALD 196 bp overlap
HDGF 3 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 196 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 196 bp overlap
ChIP K562 ENCFF195BET 196 bp overlap
HLTF 1 dataset
ChIP K562 ENCFF783OCM 196 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 196 bp overlap
ChIP K562 ENCFF348IBL 182 bp overlap
ChIP K562 ENCFF771OHZ 181 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 81 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR675LRO.MLLT1.K-562 158 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 185 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 196 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 196 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 196 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 196 bp overlap
SPI1 2 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 196 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 154 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 140 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 196 bp overlap
ChIP K562 ENCFF975RXS 196 bp overlap
ZNF324 2 datasets
ChIP K-562 ENCSR712KVZ.ZNF324.K-562 195 bp overlap
ChIP K562 ENCFF702GEM 89 bp overlap
ZNF485 1 dataset
ChIP HEK293T GSE78099.ZNF485.HEK293T 196 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 196 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF505NFV 185 bp overlap