chr3 : 23,198,597 23,199,004
407 bp 21 TFs 2 linked genes
This 407 bp open chromatin element is linked to UBE2E2-DT and UBE2E2 and is bound by 21 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
UBE2E2-DT 3.7 kb Proximal Proximity
UBE2E2 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:23,193,597 – 23,204,004
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 70 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 86 bp overlap
CDK8 1 dataset
ChIP myometrium_PT1063 GSE128230.CDK8.myometrium_PT1063 106 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 119 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 160 bp overlap
ChIP BLaER1 ENCFF346MCV 64 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 243 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 242 bp overlap
ESR1 1 dataset
ChIP ZR751 ERP000783.ESR1.ZR751 102 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 117 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 347 bp overlap
ChIP DE DE-FOXA2-2 317 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 335 bp overlap
ChIP DE DE-GATA4-2 309 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 371 bp overlap
ChIP DE DE-GATA6-2 340 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 283 bp overlap
MED1 6 datasets
ChIP SGBS GSE64233.MED1.SGBS 115 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 136 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 141 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 78 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 73 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 156 bp overlap
PPARG 1 dataset
ChIP SGBS GSE41629.PPARG.SGBS 108 bp overlap
RAD21 1 dataset
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 93 bp overlap
RELA 1 dataset
ChIP SGBS GSE64233.RELA.SGBS 149 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 99 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 140 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 268 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 346 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 223 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 182 bp overlap
ZNF585A 1 dataset
ChIP HEK293T GSE78099.ZNF585A.HEK293T 111 bp overlap