UBE2E2
ubiquitin conjugating enzyme E2 E2 | FLJ25157, UbcH8
UBE2E2 — as a Regulated Gene

TFs regulating UBE2E2 0 TFs

Transcription factors with Perturb-seq knockdown data for UBE2E2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = UBE2E2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to UBE2E2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of UBE2E2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr3:23,198,597–23,199,004 4.2 kb Proximal (<10kb) 21
chr3:23,199,300–23,199,995 3.2 kb Proximal (<10kb) 33
chr3:23,202,243–23,204,183 66 bp At TSS Multiome 694
chr3:23,274,589–23,276,263 72.1 kb Distal (>10kb) Multiome 249
chr3:23,805,437–23,807,461 602.7 kb Distal (>10kb) Multiome HiCAR 636

Genome Browser

Genomic view of the UBE2E2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr3:23,188,597 – 23,817,461
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq