Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

35 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 289 bp overlap

BRD1 2 datasets

ChIP HUES-64 GSE104059.BRD1.HUES-64 232 bp overlap

ChIP HUES-64 GSE104059.BRD1.HUES-64 240 bp overlap

BRD4 5 datasets

ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 265 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 265 bp overlap

ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 280 bp overlap

ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 355 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 284 bp overlap

CRX 1 dataset

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 313 bp overlap

CTCF 3 datasets

ChIP RWPE2 ENCFF911IEE 81 bp overlap

ChIP hESC_D5 GSE116862.CTCF.hESC_D5 233 bp overlap

ChIP neural progenitor cell ENCFF581WPG 61 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF274GAT 171 bp overlap

DNMT3B 2 datasets

ChIP HUES-8 GSE99346.DNMT3B.HUES-8 428 bp overlap

ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 135 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 276 bp overlap

FOS 2 datasets

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 150 bp overlap

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 436 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 362 bp overlap

ChIP DE DE-GATA4-2 564 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 334 bp overlap

ChIP DE DE-GATA6-2 542 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 319 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 471 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 340 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 463 bp overlap

JUN 2 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 501 bp overlap

ChIP Karpas-299 GSE151413.JUN.Karpas-299 98 bp overlap

KMT2A 1 dataset

ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 74 bp overlap

MAX 2 datasets

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 295 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 272 bp overlap

MED1 2 datasets

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 669 bp overlap

ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 683 bp overlap

MYC 1 dataset

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 203 bp overlap

NEUROD1 2 datasets

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 331 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 263 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 313 bp overlap

PAX5 1 dataset

ChIP NALM-6 GSE126300.PAX5.NALM-6 298 bp overlap

POLR2A 3 datasets

ChIP GM12892 ENCFF245LYF 136 bp overlap

ChIP H1 ENCFF566JSR 185 bp overlap

ChIP K562 ENCFF514URW 405 bp overlap

RBFOX2 5 datasets

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 103 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 103 bp overlap

ChIP K562 ENCFF196WTG 294 bp overlap

ChIP K562 ENCFF196WTG 119 bp overlap

ChIP K562 ENCFF967GRF 119 bp overlap

RBM25 2 datasets

ChIP K-562 ENCSR791OZM.RBM25.K-562 167 bp overlap

ChIP K562 ENCFF248CGR 361 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 597 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 397 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 485 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 380 bp overlap

STAT1_pS727 2 datasets

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 248 bp overlap

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 399 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 357 bp overlap

TBX21 1 dataset

ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 100 bp overlap

TCF3 1 dataset

ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 103 bp overlap

TFAP2C 3 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 71 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 277 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 255 bp overlap

YY1 1 dataset

ChIP Huh-7 GSE97411.YY1.Huh-7 98 bp overlap

ZFP36 6 datasets

ChIP A-549 ENCSR294JWV.ZFP36.A-549 348 bp overlap

ChIP A549 ENCFF505LUC 291 bp overlap

ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 242 bp overlap

ChIP HeLa-S3 ENCSR184MFH.ZFP36.HeLa-S3 96 bp overlap

ChIP K-562 ENCSR776CYN.ZFP36.K-562 338 bp overlap

ChIP K562 ENCFF255RZG 209 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 471 bp overlap

ZNF436 1 dataset

ChIP HEK293 GSE76494.ZNF436.HEK293 225 bp overlap

ZSCAN29 4 datasets

ChIP K-562 ENCSR175SZH.ZSCAN29.K-562 406 bp overlap

ChIP K-562 ENCSR635EXI.ZSCAN29.K-562 281 bp overlap

ChIP K562 ENCFF797SOU 399 bp overlap

ChIP K562 ENCFF842XOY 365 bp overlap

Gene	Dist. to TSS	Distance	Link type
LRP8	5.2 kb	Proximal	Proximity
LRP8-DT	5.5 kb	Proximal	Proximity
MAGOH	83.8 kb	Distal	Multiome
CZIB	101.8 kb	Distal	Multiome
CPT2	125.5 kb	Distal	Multiome

Genome Browser