chr2 : 211,281,480 – 211,282,351
871 bp 51 TFs 0 linked genes
This 871 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:211,276,480 – 211,287,351
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
CTCF 59 datasets
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 117 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
Motif DE_72h DE_72h-CTCF_MA0139.2 15 bp overlap
Motif DE_72h DE_72h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 221 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 229 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 182 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 189 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 196 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 284 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 141 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 176 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 184 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 231 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF210JUZ 421 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 451 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 178 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 161 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 121 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 281 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 191 bp overlap
ChIP VCaP ENCFF858YQT 631 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 364 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 142 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 235 bp overlap
ChIP brain ENCFF163BBN 591 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 365 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 194 bp overlap
ChIP chondrocyte ENCFF134ORZ 581 bp overlap
ChIP endodermal cell ENCFF471YCZ 226 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 237 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 158 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 286 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 182 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 183 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 118 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 144 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 141 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 172 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP neural progenitor cell ENCFF420RBO 242 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 292 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 421 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 420 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 166 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 285 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF093OYK 271 bp overlap
ERG 1 dataset
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 460 bp overlap
ESR1 7 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 172 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 198 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 169 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 168 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 186 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 165 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 169 bp overlap
FOXA2 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 201 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 129 bp overlap
GATA2 6 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 262 bp overlap
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 344 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 473 bp overlap
ChIP DE DE-GATA4-2 607 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 470 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 443 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 522 bp overlap
GATA6 19 datasets
ChIP AGS GSE51705.GATA6.AGS 316 bp overlap
ChIP DE DE-GATA6-1 471 bp overlap
ChIP DE DE-GATA6-2 594 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 719 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 710 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 631 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 643 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 797 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 722 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 557 bp overlap
ChIP foregut GSE117136.GATA6.foregut 482 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 526 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 469 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 564 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 495 bp overlap
Gata3 4 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Hnf1A 4 datasets
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
INSM1 2 datasets
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap
Lef1 4 datasets
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
Motif DE_48h DE_48h-Lef1_MA0768.3 8 bp overlap
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
Motif DE_72h DE_72h-Lef1_MA0768.3 8 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 262 bp overlap
NR1H4::RXRA 2 datasets
Motif DE_36h DE_36h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif DE_60h DE_60h-NR1H4RXRA_MA1146.2 13 bp overlap
NR2F1 4 datasets
Motif DE_36h DE_36h-NR2F1_MA0017.3 12 bp overlap
Motif DE_36h DE_36h-NR2F1_MA1538.1 15 bp overlap
Motif DE_60h DE_60h-NR2F1_MA0017.3 12 bp overlap
Motif DE_60h DE_60h-NR2F1_MA1538.1 15 bp overlap
NR2F6 2 datasets
Motif DE_36h DE_36h-NR2F6_MA1539.1 15 bp overlap
Motif DE_60h DE_60h-NR2F6_MA1539.1 15 bp overlap
NR4A2::RXRA 2 datasets
Motif DE_36h DE_36h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif DE_60h DE_60h-NR4A2RXRA_MA1147.2 13 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 164 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 141 bp overlap
PPARD 4 datasets
Motif DE_36h DE_36h-PPARD_MA1550.2 14 bp overlap
Motif DE_48h DE_48h-PPARD_MA1550.2 14 bp overlap
Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap
Motif DE_72h DE_72h-PPARD_MA1550.2 14 bp overlap
Prdm4 2 datasets
Motif DE_36h DE_36h-Prdm4_MA1647.3 11 bp overlap
Motif DE_60h DE_60h-Prdm4_MA1647.3 11 bp overlap
RAD21 15 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP MCF-7 ENCFF694KOM 337 bp overlap
ChIP MCF-7 ENCFF724VCQ 77 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 372 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 310 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 307 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 166 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 226 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 171 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 158 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 177 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 153 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 208 bp overlap
ChIP liver ENCFF485PAC 457 bp overlap
RARA 2 datasets
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
RBPJ 4 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
RELB 4 datasets
Motif DE_36h DE_36h-RELB_MA1117.2 7 bp overlap
Motif DE_60h DE_60h-RELB_MA1117.2 7 bp overlap
Motif DE_72h DE_72h-RELB_MA1117.2 7 bp overlap
Motif ES_0h ES_0h-RELB_MA1117.2 7 bp overlap
RXRB 4 datasets
Motif DE_36h DE_36h-RXRB_MA0855.1 14 bp overlap
Motif DE_48h DE_48h-RXRB_MA0855.1 14 bp overlap
Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap
Motif DE_72h DE_72h-RXRB_MA0855.1 14 bp overlap
RXRG 4 datasets
Motif DE_36h DE_36h-RXRG_MA0856.1 14 bp overlap
Motif DE_48h DE_48h-RXRG_MA0856.1 14 bp overlap
Motif DE_60h DE_60h-RXRG_MA0856.1 14 bp overlap
Motif DE_72h DE_72h-RXRG_MA0856.1 14 bp overlap
Rarb 2 datasets
Motif DE_36h DE_36h-Rarb_MA0857.1 16 bp overlap
Motif DE_60h DE_60h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap
Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap
Runx1 2 datasets
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
Rxra 4 datasets
Motif DE_36h DE_36h-Rxra_MA0512.2 14 bp overlap
Motif DE_48h DE_48h-Rxra_MA0512.2 14 bp overlap
Motif DE_60h DE_60h-Rxra_MA0512.2 14 bp overlap
Motif DE_72h DE_72h-Rxra_MA0512.2 14 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 362 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 522 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 422 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 160 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 172 bp overlap
SOX10 4 datasets
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 267 bp overlap
SOX4 4 datasets
Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap
Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap
Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
STAG1 1 dataset
ChIP MCF-7 ERP000209.STAG1.MCF-7 187 bp overlap
Sox5 4 datasets
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap
Motif DE_72h DE_72h-Sox5_MA0087.3 8 bp overlap
Stat5a::Stat5b 5 datasets
Motif DE_36h DE_36h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif DE_48h DE_48h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif DE_60h DE_60h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif DE_72h DE_72h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 5 datasets
Motif DE_36h DE_36h-Stat5b_MA1625.2 9 bp overlap
Motif DE_48h DE_48h-Stat5b_MA1625.2 9 bp overlap
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
Motif DE_72h DE_72h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TCF7L1 4 datasets
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_48h DE_48h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 4 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
TRPS1 4 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZNF213 3 datasets
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
ZNF701 1 dataset
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
Zfp335 5 datasets
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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