chr2 : 172,436,080 172,436,562
482 bp 32 TFs 2 linked genes
This 482 bp open chromatin element is linked to ENSG00000226963 and ITGA6 and is bound by 32 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000226963 7.5 kb Proximal Proximity
ITGA6 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:172,431,080 – 172,441,562
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AKAP8L 1 dataset
ChIP HepG2 ENCFF244QDL 254 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 350 bp overlap
CTCF 1 dataset
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
DMRT3 1 dataset
Motif DE_72h DE_72h-DMRT3_MA0610.2 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 169 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 296 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 378 bp overlap
ChIP DE DE-FOXA2-2 336 bp overlap
GATA2 2 datasets
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 217 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 482 bp overlap
ChIP DE DE-GATA4-2 482 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 482 bp overlap
ChIP DE DE-GATA6-2 482 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 258 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 396 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 214 bp overlap
HNF4A 1 dataset
ChIP HepG2 ENCFF146SSF 92 bp overlap
MEF2A 1 dataset
Motif DE_72h DE_72h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_72h DE_72h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_72h DE_72h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_72h DE_72h-MEF2D_MA0773.1 12 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 192 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 355 bp overlap
RBPJ 1 dataset
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 147 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 220 bp overlap
RORC 1 dataset
Motif DE_72h DE_72h-RORC_MA1151.2 10 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 317 bp overlap
SOX18 1 dataset
ChIP HepG2 ENCFF348QIP 276 bp overlap
Six3 1 dataset
Motif DE_72h DE_72h-Six3_MA0631.2 11 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 212 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZBTB32 1 dataset
Motif DE_72h DE_72h-ZBTB32_MA1580.1 10 bp overlap
ZKSCAN3 1 dataset
Motif DE_72h DE_72h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF528 1 dataset
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
ZNF709 1 dataset
ChIP HepG2 ENCFF151DHM 74 bp overlap