chr2 : 159,178,045 159,178,386
341 bp 40 TFs 0 linked genes
This 341 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:159,173,045 – 159,183,386
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 8 datasets
ChIP LAPC-4_R1881 GSE148358.AR.LAPC-4_R1881 218 bp overlap
ChIP VCaP GSE148358.AR.VCaP 141 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 217 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 166 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 202 bp overlap
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 218 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 162 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 248 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 126 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 300 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 267 bp overlap
BRD4 1 dataset
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 164 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 155 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 255 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 162 bp overlap
CTCF 2 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 223 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 188 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 212 bp overlap
ERG 2 datasets
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 239 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 185 bp overlap
ESR1 9 datasets
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 244 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 135 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 320 bp overlap
ChIP breast_tumor_Female_2 GSE104399.ESR1.breast_tumor_Female_2 225 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 283 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 254 bp overlap
ChIP breast_tumor_Male_5 GSE104399.ESR1.breast_tumor_Male_5 312 bp overlap
ChIP breast_tumor_Male_7 GSE104399.ESR1.breast_tumor_Male_7 189 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 225 bp overlap
FOXA1 7 datasets
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 267 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 214 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 144 bp overlap
ChIP breast_tumor_Male_1 GSE104399.FOXA1.breast_tumor_Male_1 181 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 145 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 257 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 239 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 341 bp overlap
ChIP DE DE-FOXA2-2 341 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 162 bp overlap
GATA2 1 dataset
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 244 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 266 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 341 bp overlap
ChIP DE DE-GATA4-2 341 bp overlap
ChIP foregut GSE117136.GATA4.foregut 341 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 341 bp overlap
ChIP DE DE-GATA6-2 341 bp overlap
ChIP foregut GSE117136.GATA6.foregut 301 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 341 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 185 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 245 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HOXB13 10 datasets
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 251 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 254 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 178 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 194 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 273 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 168 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 208 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 276 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 187 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 309 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 149 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 260 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 79 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 128 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 183 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 324 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 214 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 201 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 281 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 235 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 341 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 340 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF754JQR 334 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 219 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 180 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 180 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 301 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 296 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 341 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 279 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 254 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 123 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 214 bp overlap