chr2 : 79,428,313 79,429,095
782 bp 45 TFs 0 linked genes
This 782 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:79,423,313 – 79,434,095
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
AR 20 datasets
ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 252 bp overlap
ChIP 22Rv1_siARFL_R1881 GSE80742.AR.22Rv1_siARFL_R1881 218 bp overlap
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 110 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 205 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 208 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 287 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 349 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 782 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 376 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 93 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 123 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 188 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 139 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 242 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 152 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 255 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 149 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 177 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 148 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 177 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 166 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 188 bp overlap
BRD4 1 dataset
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 222 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 121 bp overlap
ERG 5 datasets
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 215 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 180 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 283 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 206 bp overlap
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 258 bp overlap
ESR1 6 datasets
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 264 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 251 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 155 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 398 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 214 bp overlap
ChIP primary-endometrium-cancer_E2_DSG GSE114737.ESR1.primary-endometrium-cancer_E2_DSG 227 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOXA1 5 datasets
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 120 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 127 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 92 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 326 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 158 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 441 bp overlap
ChIP DE DE-FOXA2-2 344 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 81 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 248 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 303 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 180 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 362 bp overlap
ChIP DE DE-GATA4-2 371 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 253 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 346 bp overlap
HNF4G 2 datasets
ChIP 22Rv1 GSE85558.HNF4G.22Rv1 214 bp overlap
ChIP 22Rv1_Dox GSE85558.HNF4G.22Rv1_Dox 245 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 53 bp overlap
MITF 1 dataset
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 246 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 68 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 245 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 266 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 82 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 284 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 107 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 123 bp overlap
NR2C2 2 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
NR3C1 2 datasets
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 104 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 227 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
Nanog 2 datasets
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
Motif DE_48h DE_48h-Nanog_MA2339.1 7 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
POU5F1 1 dataset
ChIP hiPSC GSE56567.POU5F1.hiPSC 214 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 220 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 268 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 102 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 77 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 206 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 203 bp overlap
SOX2 2 datasets
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 168 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 159 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 88 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap