Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

30 transcription factors

AR 1 dataset

ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 160 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 204 bp overlap

ESR1 1 dataset

ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 175 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 788 bp overlap

ChIP DE DE-FOXA2-2 788 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 720 bp overlap

ChIP DE DE-GATA4-2 788 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 387 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 722 bp overlap

ChIP DE DE-GATA6-2 764 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 591 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 289 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 449 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 330 bp overlap

GRHL1 2 datasets

Motif DE_36h DE_36h-GRHL1_MA0647.2 10 bp overlap

Motif DE_60h DE_60h-GRHL1_MA0647.2 10 bp overlap

HOXB13 2 datasets

ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 238 bp overlap

ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 456 bp overlap

IKZF2 2 datasets

Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

LIN54 1 dataset

Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap

MAFB 1 dataset

ChIP islet ERP004003.MAFB.islet 415 bp overlap

MAFF 2 datasets

Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap

ChIP HepG2 ENCFF452YUT 277 bp overlap

MAFK 5 datasets

ChIP A549 ENCFF371EPR 381 bp overlap

ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 180 bp overlap

ChIP HepG2 ENCFF743ZOF 241 bp overlap

ChIP HepG2 ENCFF767LDG 257 bp overlap

ChIP IMR-90 ENCFF336DHZ 271 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

NEUROD1 3 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 667 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 204 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 114 bp overlap

OSR2 1 dataset

Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap

RAD21 1 dataset

ChIP neural ENCSR198ZYJ.RAD21.neural 570 bp overlap

RARA 1 dataset

Motif DE_60h DE_60h-RARA_MA0730.1 17 bp overlap

RARA::RXRG 1 dataset

Motif DE_60h DE_60h-RARARXRG_MA1149.2 17 bp overlap

RELA 1 dataset

ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 133 bp overlap

RORA 1 dataset

Motif DE_60h DE_60h-RORA_MA0071.1 10 bp overlap

RORB 1 dataset

Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap

Rarb 1 dataset

Motif DE_60h DE_60h-Rarb_MA0858.1 17 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 708 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 258 bp overlap

SMC3 2 datasets

ChIP neural ENCSR404BPV.SMC3.neural 561 bp overlap

ChIP neural cell ENCFF795YGY 514 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 228 bp overlap

STAT1::STAT2 2 datasets

Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap

Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap

ZNF384 2 datasets

Motif DE_36h DE_36h-ZNF384_MA1125.2 8 bp overlap

Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap

ZNF90 1 dataset

ChIP HEK293T GSE78099.ZNF90.HEK293T 332 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
NRXN1		5.5 kb	Proximal	Proximity
NRXN1-DT		6.0 kb	Proximal	Proximity

Genome Browser