Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

50 transcription factors

BARX1 2 datasets

Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap

Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap

BSX 2 datasets

Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap

Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap

CTCF 1 dataset

ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 172 bp overlap

DLX1 2 datasets

Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap

Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap

DLX6 2 datasets

Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap

Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap

DUX4 2 datasets

ChIP HEK293 GSE75791.DUX4.HEK293 296 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 261 bp overlap

Dlx3 2 datasets

Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap

Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap

Dlx4 2 datasets

Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap

Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 220 bp overlap

ChIP hESC GSE26097.EOMES.hESC 229 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 499 bp overlap

ChIP DE DE-FOXA2-2 488 bp overlap

GATA3 1 dataset

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 142 bp overlap

GATA4 4 datasets

ChIP A-549 GSE85002.GATA4.A-549 164 bp overlap

ChIP DE DE-GATA4-1 714 bp overlap

ChIP DE DE-GATA4-2 1141 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 807 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 567 bp overlap

ChIP DE DE-GATA6-2 1326 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 958 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 1024 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 148 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 1217 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 886 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 1369 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 625 bp overlap

GBX2 2 datasets

Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap

Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap

HESX1 2 datasets

Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap

Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap

HNRNPK 1 dataset

ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 154 bp overlap

HOXA7 2 datasets

Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap

Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 234 bp overlap

JUN 5 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 397 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 80 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 277 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 306 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 125 bp overlap

LBX2 2 datasets

Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap

Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap

LHX2 2 datasets

Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap

Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap

MED1 2 datasets

ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 118 bp overlap

ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 344 bp overlap

MED12 2 datasets

ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 62 bp overlap

ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 87 bp overlap

MEIS1 2 datasets

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

MSX1 2 datasets

Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap

Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap

MSX2 2 datasets

Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap

Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap

Msx3 2 datasets

Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap

Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap

NEUROD1 3 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 371 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 345 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 227 bp overlap

NME2 1 dataset

ChIP A-549_IND GSE40300.NME2.A-549_IND 61 bp overlap

Nobox 2 datasets

Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap

Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap

PAX5 1 dataset

ChIP fetal_testis GSE100639.PAX5.fetal_testis 161 bp overlap

PGR 1 dataset

ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 282 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 273 bp overlap

RAX 2 datasets

Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap

Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap

RBPJ 1 dataset

Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap

RUNX3 1 dataset

Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 789 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 274 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 630 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 218 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 1009 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 483 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1168 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 847 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 1102 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 78 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 343 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 816 bp overlap

SS18 1 dataset

ChIP Aska-SS GSE108025.SS18.Aska-SS 709 bp overlap

STAT3 1 dataset

Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap

Stat6 1 dataset

Motif DE_36h DE_36h-Stat6_MA0520.2 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 435 bp overlap

TCF21 1 dataset

ChIP HCASMC GSE124011.TCF21.HCASMC 257 bp overlap

ZBTB26 2 datasets

Motif DE_36h DE_36h-ZBTB26_MA1579.2 8 bp overlap

Motif DE_48h DE_48h-ZBTB26_MA1579.2 8 bp overlap

ZNF416 1 dataset

Motif DE_36h DE_36h-ZNF416_MA1979.2 10 bp overlap

ZNF766 1 dataset

Motif DE_36h DE_36h-ZNF766_MA2098.1 9 bp overlap

Zfp809 1 dataset

Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap

Genome Browser